RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 LRRC34Q8IZ02 419 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 TTLQ8NG68 377 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 THOC1Q96FV9 657 aaKnown RBP16.87■□□□□ 0.29
CTSB-222ENST00000531551 OR6C1Q96RD1 312 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 CMKLR1Q99788 373 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 SARGQ9BW04 601 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 FANCEQ9HB96 536 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 FGFR1OP2Q9NVK5 253 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 PTGDR2Q9Y5Y4 395 aa16.87■□□□□ 0.29
CTSB-222ENST00000531551 MAGEB17A8MXT2 336 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 TMX2-CTNND1H3BSU7 103 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 TGFB1P01137 390 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 AHRP35869 848 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 RPS13P62277 151 aaKnown RBP16.86■□□□□ 0.29
CTSB-222ENST00000531551 RELAQ04206 551 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 SF3A3Q12874 501 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■■■■ 32.1
CTSB-222ENST00000531551 TUBB3Q13509 450 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 VN1R4Q7Z5H5 301 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 TRPV3Q8NET8 790 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 THAP11Q96EK4 314 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 CHRNA10Q9GZZ6 450 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 FGF21Q9NSA1 209 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 HAO1Q9UJM8 370 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 ADAM21Q9UKJ8 722 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 AP1M2Q9Y6Q5 423 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 FAM149AA5PLN7 773 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 PIP5K1BO14986 540 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 SLC35G6P0C7Q6 338 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 LINC00032P0C843 101 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 SEC24CP53992 1094 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 ACY1Q03154 408 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 IMPG1Q17R60 797 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 UGT3A2Q3SY77 523 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 WASHC2DQ5SRD0 308 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 VN1R5Q7Z5H4 357 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 KIRREL3Q8IZU9 778 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 CSNK1A1LQ8N752 337 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 ZNF473Q8WTR7 871 aaKnown RBP16.86■□□□□ 0.29
CTSB-222ENST00000531551 CHMP6Q96FZ7 201 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 NUF2Q9BZD4 464 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 RHBGQ9H310 441 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 LOXL2Q9Y4K0 774 aa16.86■□□□□ 0.29
CTSB-222ENST00000531551 PCNX2A6NKB5 2137 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 P2RX6O15547 441 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 SRPX2O60687 465 aaPredicted RBP16.85■□□□□ 0.29
CTSB-222ENST00000531551 CCL4P13236 92 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 GABRA4P48169 554 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 TARDBPQ13148 414 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■■■■■ 31.2
CTSB-222ENST00000531551 DGLUCYQ7Z3D6 616 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 WDR75Q8IWA0 830 aaKnown RBP16.85■□□□□ 0.29
CTSB-222ENST00000531551 ZNF655Q8N720 491 aaPredicted RBP16.85■□□□□ 0.29
CTSB-222ENST00000531551 CAMKVQ8NCB2 501 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 USP7Q93009 1102 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 RNF31Q96EP0 1072 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 FAR2Q96K12 515 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 SPRTNQ9H040 489 aaPredicted RBP16.85■□□□□ 0.29
CTSB-222ENST00000531551 FAM107BQ9H098 131 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 OR51B5Q9H339 312 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 TUBB1Q9H4B7 451 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 DMRT3Q9NQL9 472 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 DLL3Q9NYJ7 618 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 ADGRE2Q9UHX3 823 aa16.85■□□□□ 0.29
CTSB-222ENST00000531551 SAP18O00422 153 aaKnown RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 HYAL3O43820 417 aaPredicted RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 CLEC3AO75596 197 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 OR2B3O76000 313 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 JUNP05412 331 aaKnown RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 PIK3CBP42338 1070 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 HMGCS1Q01581 520 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 RGS1Q08116 209 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 RAB11FIP2Q7L804 512 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 MARCH9Q86YJ5 346 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 GPR135Q8IZ08 494 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 OR1L3Q8NH93 324 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 CREB3L4Q8TEY5 395 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 ZNF501Q96CX3 271 aaPredicted RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 ZNF317Q96PQ6 595 aaPredicted RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 CTRCQ99895 268 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 NLNQ9BYT8 704 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 RABEP2Q9H5N1 569 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 NPHS2Q9NP85 383 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 SERTAD3Q9UJW9 196 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 SLC12A4Q9UP95 1085 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 SNRNP200O75643 2136 aaKnown RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 SLCO1B7G3V0H7 640 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 HDAC3O15379 428 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 ITIH1P19827 911 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 GSTM2P28161 218 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 SERPINB1P30740 379 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 BTKQ06187 659 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 TCTE1Q5JU00 501 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 VWA5B1Q5TIE3 1220 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 TMPRSS12Q86WS5 348 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 KCT2Q8NC54 265 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 ZCCHC10Q8TBK6 192 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 ADAMTS14Q8WXS8 1223 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 C19orf60Q96EN9 201 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 CMTM7Q96FZ5 175 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 F2RL3Q96RI0 385 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms