RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SIGLEC12Q96PQ1 595 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 OR2A5Q96R48 311 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 MDFIQ99750 246 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 FERMT1Q9BQL6 677 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 DPH7Q9BTV6 452 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 ACAT2Q9BWD1 397 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 TGIF2Q9GZN2 237 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 CCDC134Q9H6E4 229 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 CHST11Q9NPF2 352 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 GALPQ9UBC7 116 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 SUCOQ9UBS9 1254 aaKnown RBP8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 SLC39A10Q9ULF5 831 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 SNX24Q9Y343 169 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 FAM169AQ9Y6X4 670 aa8.71□□□□□ -1.02
CHMP4A-205ENST00000531158 VPS13CQ709C8 3753 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 A0A0A6YYC8 382 aaPredicted RBP8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 I3L1I5 382 aaPredicted RBP8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 FKBP9O95302 570 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 MATN4O95460 622 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 RPN2P04844 631 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 C8BP07358 591 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 ARNTP27540 789 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 EMP3P54852 163 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 MAGOHP61326 146 aaKnown RBP8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF33BQ06732 778 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 CDH17Q12864 832 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 GBX1Q14549 363 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 CCNG2Q16589 344 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 MUM1Q2TAK8 710 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF425Q6IV72 752 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 LRRC8BQ6P9F7 803 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 DRICH1Q6PGQ1 229 aaPredicted RBP8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 SUSD1Q6UWL2 747 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 RIPOR1Q6ZS17 1223 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 TAOK1Q7L7X3 1001 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 PRSS41Q7RTY9 318 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 FGD2Q7Z6J4 655 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 BEST3Q8N1M1 668 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 MDS2Q8NDY4 140 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 DNAJB8Q8NHS0 232 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 CABS1Q96KC9 395 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 BIRC8Q96P09 236 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 ZFYVE21Q9BQ24 234 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 ETNK1Q9HBU6 452 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 RIC8BQ9NVN3 520 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 RIMKLBQ9ULI2 386 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 TCAF1Q9Y4C2 921 aa8.7□□□□□ -1.02
CHMP4A-205ENST00000531158 GMNCA6NCL1 334 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ASPDHA6ND91 283 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ARHGEF33A8MVX0 844 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 E7EVH7 732 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ADAM10O14672 748 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 PRMT5O14744 637 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 RGS16O15492 202 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 NIPSNAP2O75323 286 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CRYABP02511 175 aaKnown RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 STATHP02808 62 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ABHD2P08910 425 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ETS1P14921 441 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CAPN3P20807 821 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 AGAP20933 346 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CXCR2P25025 360 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ADRA1DP25100 572 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CRADDP78560 199 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 HSF1Q00613 529 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 OASLQ15646 514 aaKnown RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 KCTD19Q17RG1 926 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 FASTKD1Q53R41 847 aaKnown RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF766Q5HY98 468 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 RNFT1Q5M7Z0 435 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 H3F3CQ6NXT2 135 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 XKRXQ6PP77 449 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 Q6ZPB1 254 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 LINC00523Q86TU6 105 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 PLD3Q8IV08 490 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 SIAH3Q8IW03 269 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 RIBC1Q8N443 379 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CSNK1A1LQ8N752 337 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CCDC89Q8N998 374 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 DNAAF3Q8N9W5 541 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 PPFIBP2Q8ND30 876 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 OR6P1Q8NGX9 317 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 FAM136AQ96C01 138 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 MTFMTQ96DP5 389 aaKnown RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 MVB12AQ96EY5 273 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 MMABQ96EY8 250 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 SCMH1Q96GD3 660 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 VPS50Q96JG6 964 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 SERPINB12Q96P63 405 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CCT8L2Q96SF2 557 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 TREX2Q9BQ50 279 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 PLCD4Q9BRC7 762 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 RAB11FIP5Q9BXF6 653 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 FRMD8P1Q9BZ68 369 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms