RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 MOCOSQ96EN8 888 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 C17orf62Q9BQA9 187 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 DRC3Q9H069 523 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 MRPL46Q9H2W6 279 aaKnown RBP11.3□□□□□ -0.6
LTBP3-219ENST00000530990 PPCSQ9HAB8 311 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 ZNF304Q9HCX3 659 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 OPTCQ9UBM4 332 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 ZFP69BQ9UJL9 534 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 RAB21Q9UL25 225 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 PADI2Q9Y2J8 665 aa11.3□□□□□ -0.6
LTBP3-219ENST00000530990 ZFYVE26Q68DK2 2539 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 K7EPI3 171 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 FFAR3O14843 346 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 GPR42O15529 346 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 SIX3O95343 332 aaPredicted RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 ONECUT2O95948 504 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 SERPIND1P05546 499 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 SBK3P0C264 359 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 PYGBP11216 843 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 IL1RNP18510 177 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 CD22P20273 847 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 FBLP22087 321 aaKnown RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 AHRP35869 848 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 CHIT1Q13231 466 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 RBBP5Q15291 538 aaKnown RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 NDUFA9Q16795 377 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 UGT8Q16880 541 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 XKR6Q5GH73 641 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 TMEM214Q6NUQ4 689 aaKnown RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 PCSK4Q6UW60 755 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 TEX9Q8N6V9 391 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 AMER3Q8N944 861 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 ACMSDQ8TDX5 336 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 ADAMTS17Q8TE56 1095 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 EXTL1Q92935 676 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 WDR34Q96EX3 536 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 PTCD3Q96EY7 689 aaKnown RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 MMABQ96EY8 250 aaPredicted RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 MRPL57Q9BQC6 102 aaKnown RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 CAPS2Q9BXY5 557 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 EHD1Q9H4M9 534 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 TMEM216Q9P0N5 145 aa11.29□□□□□ -0.6
LTBP3-219ENST00000530990 PTRH2Q9Y3E5 179 aaKnown RBP11.29□□□□□ -0.6
LTBP3-219ENST00000530990 CACNA1GO43497 2377 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 EIF4E1BA6NMX2 242 aaKnown RBP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 A8MT66 165 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 E2F3O00716 465 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 CDH16O75309 829 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 ITGB2P05107 769 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 PIM1P11309 404 aaPredicted RBP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 KRT15P19012 456 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 EEF1DP29692 281 aaKnown RBP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 FOLR3P41439 243 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 IRF8Q02556 426 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 PWP1Q13610 501 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 FAM53BQ14153 422 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 DOC2AQ14183 400 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 E2F2Q14209 437 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 RASA2Q15283 850 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 PCBP2Q15366 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 NKG7Q16617 165 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 TBR1Q16650 682 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SYT16Q17RD7 645 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 DEFB109BQ30KR1 87 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 LINC00303Q3SY05 128 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 ADNP2Q6IQ32 1131 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 TMIGD1Q6UXZ0 262 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 GOLGA7Q7Z5G4 137 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 PDSS2Q86YH6 399 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SHISA5Q8N114 240 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 KRT78Q8N1N4 520 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 TMEM151AQ8N4L1 468 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 MREGQ8N565 214 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 OR9A4Q8NGU2 314 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 OR2Y1Q8NGV0 311 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 NT5CQ8TCD5 201 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 COL26A1Q96A83 441 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 PHF21BQ96EK2 531 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 UBL7Q96S82 380 aaPredicted RBP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SPSB2Q99619 263 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SLC26A1Q9H2B4 701 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 WDR54Q9H977 334 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 COPG2Q9UBF2 871 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SMG1Q96Q15 3661 aaKnown RBP11.28□□□□□ -0.6
LTBP3-219ENST00000530990 SCN2AQ99250 2005 aa11.28□□□□□ -0.6
LTBP3-219ENST00000530990 ATMQ13315 3056 aa11.27□□□□□ -0.6
LTBP3-219ENST00000530990 TLDC2A0PJX2 215 aa11.27□□□□□ -0.61
LTBP3-219ENST00000530990 ZNF860A6NHJ4 632 aa11.27□□□□□ -0.61
LTBP3-219ENST00000530990 C4orf51C9J302 202 aa11.27□□□□□ -0.61
LTBP3-219ENST00000530990 STX16-NPEPL1H3BU86 382 aa11.27□□□□□ -0.61
LTBP3-219ENST00000530990 STX16O14662 325 aa11.27□□□□□ -0.61
LTBP3-219ENST00000530990 PRPF4O43172 522 aaKnown RBP eCLIP11.27□□□□□ -0.61
LTBP3-219ENST00000530990 SMIM24O75264 130 aa11.27□□□□□ -0.61
LTBP3-219ENST00000530990 H2AFYO75367 372 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms