RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PTGER3P43115 390 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 QPRTQ15274 297 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 AAK1Q2M2I8 961 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 ADGRF1Q5T601 910 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 TMEM207Q6UWW9 146 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 DTX3Q8N9I9 347 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 MYDGFQ969H8 173 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 IMP4Q96G21 291 aaKnown RBP17.32■□□□□ 0.36
LTBP3-210ENST00000528516 TFB2MQ9H5Q4 396 aaKnown RBP17.32■□□□□ 0.36
LTBP3-210ENST00000528516 ASAH2Q9NR71 780 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 PIPSLA2A3N6 862 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 VIPP01282 170 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 NFKB2Q00653 900 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 FAM131AQ6UXB0 335 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 LMNTD1Q8N9Z9 388 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 DEDD2Q8WXF8 326 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 ST6GAL2Q96JF0 529 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 GFM1Q96RP9 751 aaKnown RBP17.32■□□□□ 0.36
LTBP3-210ENST00000528516 C1orf109Q9NX04 203 aa17.32■□□□□ 0.36
LTBP3-210ENST00000528516 MTMR11A4FU01 709 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 CREG1O75629 220 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 SLITRK5O94991 958 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 BUD31P41223 144 aaPredicted RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 OR1E2P47887 323 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PON2Q15165 354 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 TAF1AQ15573 450 aaPredicted RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PTCHD3Q3KNS1 767 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 RAB42Q8N4Z0 105 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 GALNT6Q8NCL4 622 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 NELL1Q92832 810 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 EXOSC8Q96B26 276 aaKnown RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 CNPPD1Q9BV87 410 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 IMP3Q9NV31 184 aaKnown RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 KCNN3Q9UGI6 736 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 GRIP1Q9Y3R0 1128 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 C2orf78A6NCI8 922 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 CLDN24A6NM45 220 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 BTN3A3O00478 584 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 FGF4P08620 206 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 BMP1P13497 986 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 CD1DP15813 335 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 TIE1P35590 1138 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 SPAM1P38567 509 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 FEN1P39748 380 aaKnown RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PRKCDQ05655 676 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 KLHL17Q6TDP4 642 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 FAM124AQ86V42 546 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 ANKK1Q8NFD2 765 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 OR4K1Q8NGD4 311 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PROKR1Q8TCW9 393 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PHF21AQ96BD5 680 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 CDADC1Q9BWV3 514 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 DUSP21Q9H596 190 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 FARSBQ9NSD9 589 aaKnown RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 ZIM2Q9NZV7 527 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 RHCGQ9UBD6 479 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PSME4Q14997 1843 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 SCELO95171 688 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PGRP06401 933 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 PREPP48147 710 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 ZXDBP98169 803 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 ZFAND4Q86XD8 727 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 UBXN10Q96LJ8 280 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 KCNC2Q96PR1 638 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 YIPF4Q9BSR8 244 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 FAM83DQ9H4H8 585 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 SNX7Q9UNH6 387 aa17.31■□□□□ 0.36
LTBP3-210ENST00000528516 DNMT3AQ9Y6K1 912 aaPredicted RBP17.31■□□□□ 0.36
LTBP3-210ENST00000528516 TRAV19A0A0A6YYK7 116 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 B8ZZF3 427 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 PER2O15055 1255 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 KIAA0513O60268 411 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 AOC2O75106 756 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 ERN1O75460 977 aaKnown RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 NR2F1P10589 423 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 ZNF267Q14586 743 aaPredicted RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 RTP2Q5QGT7 225 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 GOLGA7Q7Z5G4 137 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SORCS1Q8WY21 1168 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 AP2M1Q96CW1 435 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 ZNF583Q96ND8 569 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 CRISPLD1Q9H336 500 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 DNAJC11Q9NVH1 559 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 MRPS23Q9Y3D9 190 aaKnown RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 H3BM21 787 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SELPP16109 830 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 MYL9P24844 172 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 EPHA2P29317 976 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 DDOSTP39656 456 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 GPAT3Q53EU6 434 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 FAM9CQ8IZT9 166 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 KLHDC9Q8NEP7 349 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 ZNF675Q8TD23 568 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SH3RF2Q8TEC5 729 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 IPCEF1Q8WWN9 437 aaPredicted RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 DPH2Q9BQC3 489 aaPredicted RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 MTG2Q9H4K7 406 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SYNDIG1Q9H7V2 258 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SLC9A8Q9Y2E8 581 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms