RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 EPS8Q12929 822 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 BIRC2Q13490 618 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 PDE7AQ13946 482 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 PON2Q15165 354 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 C6orf52Q5T4I8 152 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 DEPDC1Q5TB30 811 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 DNAJC14Q6Y2X3 702 aaPredicted RBP14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 EP400NLQ6ZTU2 488 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 CARM1Q86X55 608 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 ADHFE1Q8IWW8 467 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 CHERPQ8IWX8 916 aaKnown RBP14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 GFM2Q969S9 779 aaKnown RBP14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 SLC47A1Q96FL8 570 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 C12orf66Q96MD2 445 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 OSBPL10Q9BXB5 764 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 IKZF5Q9H5V7 419 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 ZNF576Q9H609 170 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 AASDHPPTQ9NRN7 309 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 PNPLA3Q9NST1 481 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 USP22Q9UPT9 525 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 PCYT1BQ9Y5K3 369 aaPredicted RBP14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 COLEC10Q9Y6Z7 277 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 ACOX3O15254 700 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 TPST1O60507 370 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 ADAM23O75077 832 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 CPSF4O95639 269 aaKnown RBP14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 APBB3O95704 486 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 HPRP00739 348 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 EGFP01133 1207 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 TGFB1P01137 390 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 ACP5P13686 325 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 POU3F3P20264 500 aaPredicted RBP14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 IGFALSP35858 605 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 CDKN2CP42773 168 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 RAB28P51157 221 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 ARFIP1P53367 373 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 REEP5Q00765 189 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 MERTKQ12866 999 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 KRT33BQ14525 404 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 RBBP5Q15291 538 aaKnown RBP14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 HKDC1Q2TB90 917 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 UAP1L1Q3KQV9 507 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 GTDC1Q4AE62 458 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 FAM71E1Q6IPT2 247 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 WASH2PQ6VEQ5 465 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 ANKRD46Q86W74 232 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 TRIM69Q86WT6 500 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 TBC1D19Q8N5T2 526 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 OR2L8Q8NGY9 312 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 C16orf78Q8WTQ4 265 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 NCLNQ969V3 563 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 TBC1D20Q96BZ9 403 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 SDCCAG3Q96C92 435 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 PYURFQ96I23 114 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 CAMK1GQ96NX5 476 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 INSM2Q96T92 566 aaPredicted RBP14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 TBCDQ9BTW9 1192 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 MENTQ9BUN1 341 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 MRPS26Q9BYN8 205 aaKnown RBP14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 SH3BP4Q9P0V3 963 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 CD207Q9UJ71 328 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 ADAM29Q9UKF5 820 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 OAZ3Q9UMX2 235 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 PIAS3Q9Y6X2 628 aa14.18□□□□□ -0.14
ECHDC1-220ENST00000528402 ARHGAP10A1A4S6 786 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 LRRC72A6NJI9 287 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 H0YAE9 185 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 GPR37L1O60883 481 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 GSNP06396 782 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 RXRGP48443 463 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 TRA2BP62995 288 aaKnown RBP14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 PRDX1Q06830 199 aaKnown RBP14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 C2orf80Q0P641 193 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 VMACQ2NL98 169 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 KRT80Q6KB66 452 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 ARMCX6Q7L4S7 300 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 SLC9B2Q86UD5 537 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 PHACTR4Q8IZ21 702 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 GPR156Q8NFN8 814 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 PPCDCQ96CD2 204 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 ZNF764Q96H86 408 aaPredicted RBP14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 IL17FQ96PD4 163 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 TPT1P8Q9HAU6 139 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 TM7SF3Q9NS93 570 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 SLC6A13Q9NSD5 602 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 SMPD3Q9NY59 655 aaPredicted RBP14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 UBAP1Q9NZ09 502 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 TAC3Q9UHF0 121 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 SH2B3Q9UQQ2 575 aa14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 MKI67P46013 3256 aaKnown RBP14.17□□□□□ -0.14
ECHDC1-220ENST00000528402 FAM149AA5PLN7 773 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 TNFRSF10CO14798 259 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 KCNK5O95279 499 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 FURINP09958 794 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ZNF23P17027 643 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 MYF6P23409 242 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 HTR1BP28222 390 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms