RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 FOXM1Q08050 763 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 GTF2H2Q13888 395 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PCBP2Q15366 365 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 CATSPEREQ5SY80 951 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PRAMEF9Q5VWM5 478 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 FAM219BQ5XKK7 198 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 ZNF425Q6IV72 752 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 GTF2H2CQ6P1K8 395 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PAQR7Q86WK9 346 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 TICAM1Q8IUC6 712 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PLD3Q8IV08 490 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 SLC22A9Q8IVM8 553 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 C10orf107Q8IVU9 208 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 CARFQ8N187 725 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 DTWD1Q8N5C7 304 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 MGARPQ8TDB4 240 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 SLC41A2Q96JW4 573 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PRAP1Q96NZ9 151 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 FCRL4Q96PJ5 515 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 CMKLR1Q99788 373 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PLCD4Q9BRC7 762 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 ERVK-6Q9BXR3 956 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 SPNS1Q9H2V7 528 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 ZNF71Q9NQZ8 489 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 TUBD1Q9UJT1 453 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 ANGPTL3Q9Y5C1 460 aa11.05□□□□□ -0.64
CCDC90B-210ENST00000528149 PCSK5Q92824 1860 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ADGRG4Q8IZF6 3080 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 A0A0J9YVX5 310 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 FEZF1A0PJY2 475 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 HMGB1P1B2RPK0 211 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 TM9SF1O15321 606 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 CTSVO60911 334 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ZWINTO95229 277 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 STATHP02808 62 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 VARSP26640 1264 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 COL8A1P27658 744 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ARL1P40616 181 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ETV4P43268 484 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 SERPINB4P48594 390 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 CDH13P55290 713 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 CSNK1G2P78368 415 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ABATP80404 500 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 REEP5Q00765 189 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 MC2RQ01718 297 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 TUBB3Q13509 450 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 RBBP7Q16576 425 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 UNC50Q53HI1 259 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ZNF678Q5SXM1 525 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ATP1A1-AS1Q5TC04 95 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 LCN10Q6JVE6 187 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 NXPE4Q6UWF7 544 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 SLCO4C1Q6ZQN7 724 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 RNF44Q7L0R7 432 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 KMT5CQ86Y97 462 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 SHISA5Q8N114 240 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 D2HGDHQ8N465 521 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 CCNYL1Q8N7R7 359 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ZNF483Q8TF39 744 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 SSC4DQ8WTU2 575 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 L3HYPDHQ96EM0 354 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 SPRY4Q9C004 299 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 ZBTB26Q9HCK0 441 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 PDE7BQ9NP56 450 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 SEMA4BQ9NPR2 832 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 GPRC5BQ9NZH0 403 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 KLK4Q9Y5K2 254 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 TNPO3Q9Y5L0 923 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 MRPS18BQ9Y676 258 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 KCNE2Q9Y6J6 123 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 CELSR1Q9NYQ6 3014 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 HIVEP3Q5T1R4 2406 aa11.04□□□□□ -0.64
CCDC90B-210ENST00000528149 MTORP42345 2549 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 SEC16AO15027 2179 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 LOC101059948A0A1B0GTJ6 334 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 WDR91A4D1P6 747 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 TMEM150CB9EJG8 249 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 H3BQF6 201 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 TMX2-CTNND1H3BSU7 103 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 OR7A17O14581 309 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 CLGNO14967 610 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 NVLO15381 856 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 SUPT7LO94864 414 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 DHRS4L1P0CG22 281 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 EZRP15311 586 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 EPB42P16452 691 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 GNAZP19086 355 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 CD22P20273 847 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 F8A1P23610 371 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 DCTP40126 519 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 GABRA4P48169 554 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 PIK3CGP48736 1102 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 CCR8P51685 355 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 CHIT1Q13231 466 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 EIF3IQ13347 325 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 SLBPQ14493 270 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 NAA25Q14CX7 972 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 XKR6Q5GH73 641 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 TMTC4Q5T4D3 741 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms