RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CENPLQ8N0S6 344 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SCML4Q8N228 414 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 CNTD1Q8N815 330 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 TDRD5Q8NAT2 981 aaKnown RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM35BQ8NCS4 154 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 MCPH1Q8NEM0 835 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 CMASQ8NFW8 434 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 OR4M1Q8NGD0 313 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 OR6B3Q8NGW1 331 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 OR10T2Q8NGX3 314 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 RHOXF1Q8NHV9 184 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 HTR3CQ8WXA8 447 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 CPT1BQ92523 772 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SYN2Q92777 582 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF566Q969W8 418 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 KIAA1191Q96A73 305 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 RFT1Q96AA3 541 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 FAM122AQ96E09 287 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 OXNAD1Q96HP4 312 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 HSFY1Q96LI6 401 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 PPP1R36Q96LQ0 422 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 LURAP1Q96LR2 239 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 CCNL2Q96S94 520 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 LBHD1Q9BQE6 289 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 TCEAL7Q9BRU2 100 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 COPS4Q9BT78 406 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM121Q9BTD3 319 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 FSD1Q9BTV5 496 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 PTDSS2Q9BVG9 487 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 GSDMCQ9BYG8 508 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 BTBD1Q9H0C5 482 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SPNS1Q9H2V7 528 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 ASB7Q9H672 318 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 ESRP2Q9H6T0 727 aaKnown RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 LRRC4Q9HBW1 653 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 ZFP14Q9HCL3 533 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 DDX4Q9NQI0 724 aaKnown RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SNX15Q9NRS6 342 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 PLSCR3Q9NRY6 295 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 BLOC1S4Q9NUP1 217 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 MED9Q9NWA0 146 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 PAK1IP1Q9NWT1 392 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 DNAJC28Q9NX36 388 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 BABAM2Q9NXR7 383 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SAGE1Q9NXZ1 904 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SH3BP4Q9P0V3 963 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 NFKBIL1Q9UBC1 381 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 PCYOX1Q9UHG3 505 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 CPA4Q9UI42 421 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 SERPINB13Q9UIV8 391 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 ELF5Q9UKW6 265 aaPredicted RBP3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 LRP12Q9Y561 859 aa3.59□□□□□ -1.83
CLNS1A-209ENST00000527299 CPS1P31327 1500 aa3.59□□□□□ -1.84
CLNS1A-209ENST00000527299 ZCCHC11Q5TAX3 1644 aaKnown RBP3.59□□□□□ -1.84
CLNS1A-209ENST00000527299 TP53BP1Q12888 1972 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PRSS51A0A1B0GVH4 220 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 A0A1W2PRG0 241 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 A0A1W2PS29 197 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ANKDD1BA6NHY2 528 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 NCF1BA6NI72 391 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 LINC00473A8K010 186 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MPTX1A8MV57 137 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 NCF1CA8MVU1 366 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 KRBOX1C9JBD0 128 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 H7C0S8 307 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 J3KRW8 73 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CDC7O00311 574 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 STX7O15400 261 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TOX3O15405 576 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TIPRLO75663 272 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 OAZ2O95190 189 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MBP02144 154 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 C1QBP02746 253 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SERPINA5P05154 406 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 KLK3P07288 261 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 GP1BAP07359 652 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ABHD2P08910 425 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CNPP09543 421 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ZDHHC11BP0C7U3 371 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 RRASP10301 218 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MLNP12872 115 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 COX4I1P13073 169 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 JUPP14923 745 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CREB1P16220 341 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF26P17031 533 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SPI1P17947 270 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ATF3P18847 181 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 AOC1P19801 751 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TCN1P20061 433 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ABCB4P21439 1286 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MYF6P23409 242 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 LAP3P28838 519 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CRABP1P29762 137 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 GRIA1P42261 906 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CPA2P48052 419 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 LSSP48449 732 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PPP3CCP48454 512 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms