RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 GSTM2P28161 218 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 CRABP2P29373 138 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 PHBP35232 272 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 SCTRP47872 440 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 CD97P48960 835 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 SLC7A5Q01650 507 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 RAPSNQ13702 412 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 TGFBIQ15582 683 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 TRADDQ15628 312 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 NADK2Q4G0N4 442 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 GLE1Q53GS7 698 aaKnown RBP19.54■□□□□ 0.72
VPS28-206ENST00000526734 SLC6A19Q695T7 634 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 NXPE4Q6UWF7 544 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 ZADH2Q8N4Q0 377 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 EFCAB3Q8N7B9 438 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 TRPV3Q8NET8 790 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 NT5CQ8TCD5 201 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 ZNF592Q92610 1267 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 MIB2Q96AX9 1013 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 RHBDF1Q96CC6 855 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 UBXN10Q96LJ8 280 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 CLK4Q9HAZ1 481 aaKnown RBP19.54■□□□□ 0.72
VPS28-206ENST00000526734 GPRC5BQ9NZH0 403 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 SLC22A14Q9Y267 594 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 MRPS2Q9Y399 296 aaKnown RBP19.54■□□□□ 0.72
VPS28-206ENST00000526734 NUP210LQ5VU65 1888 aa19.54■□□□□ 0.72
VPS28-206ENST00000526734 MDC1Q14676 2089 aaKnown RBP19.53■□□□□ 0.72
VPS28-206ENST00000526734 LOC102723996A0A087X1L8 192 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 NSG1A0A0A6YYJ2 146 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 ESYT3A0FGR9 886 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CTAGE15A4D2H0 777 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 PYCARD-AS1I3L0S3 204 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 PHGDHO43175 533 aaKnown RBP19.53■□□□□ 0.72
VPS28-206ENST00000526734 NDUFS4O43181 175 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 BMP10O95393 424 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CTAGE8P0CG41 777 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CD1DP15813 335 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 IL1RNP18510 177 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 SLC6A12P48065 614 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CATSPEREQ5SY80 951 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 AGAP7PQ5VUJ5 663 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 SULT1C3Q6IMI6 304 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 NDUFAF7Q7L592 441 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 TMPRSS11BQ86T26 416 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CTAGE6Q86UF2 777 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 GPSM1Q86YR5 675 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 RELL1Q8IUW5 271 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CTAGE4Q8IX94 777 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 RBMXL3Q8N7X1 1067 aaKnown RBP19.53■□□□□ 0.72
VPS28-206ENST00000526734 TTLQ8NG68 377 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 SEC16BQ96JE7 1060 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 TSNARE1Q96NA8 513 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 AGAP4Q96P64 663 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 PITHD1Q9GZP4 211 aaPredicted RBP19.53■□□□□ 0.72
VPS28-206ENST00000526734 SLAMF7Q9NQ25 335 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 C19orf25Q9UFG5 118 aaPredicted RBP19.53■□□□□ 0.72
VPS28-206ENST00000526734 MKL2Q9ULH7 1088 aa19.53■□□□□ 0.72
VPS28-206ENST00000526734 CCDC189A1A4V9 331 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 WDR47O94967 919 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 GGT5P36269 586 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 SLMAPQ14BN4 828 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 TMEM205Q6UW68 189 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 RIPOR1Q6ZS17 1223 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 ABHD13Q7L211 337 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 LAPTM4BQ86VI4 370 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 KBTBD2Q8IY47 623 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 AFAP1L2Q8N4X5 818 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 KCT2Q8NC54 265 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 OR51Q1Q8NH59 317 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 ZCCHC10Q8TBK6 192 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 METTL21AQ8WXB1 218 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 KIAA1191Q96A73 305 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 OR1F2PQ96R84 312 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 CYTH2Q99418 400 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 EPS8L2Q9H6S3 715 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 WWOXQ9NZC7 414 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 B3GNT3Q9Y2A9 372 aa19.52■□□□□ 0.72
VPS28-206ENST00000526734 ALOX12BO75342 701 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 H2AFYO75367 372 aaKnown RBP19.51■□□□□ 0.71
VPS28-206ENST00000526734 KLHL18O94889 574 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 STATHP02808 62 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 S100BP04271 92 aaPredicted RBP19.51■□□□□ 0.71
VPS28-206ENST00000526734 COX6A1P12074 109 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 ICAM2P13598 275 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 ALOX12P18054 663 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 XCR1P46094 333 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 MAT1AQ00266 395 aaKnown RBP19.51■□□□□ 0.71
VPS28-206ENST00000526734 MEF2AQ02078 507 aaPredicted RBP19.51■□□□□ 0.71
VPS28-206ENST00000526734 CDC16Q13042 620 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 SYT16Q17RD7 645 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 IGFL2Q6UWQ7 119 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 RAPH1Q70E73 1250 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 TBC1D1Q86TI0 1168 aaPredicted RBP19.51■□□□□ 0.71
VPS28-206ENST00000526734 IQCKQ8N0W5 287 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 PDPRQ8NCN5 879 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 KIF18AQ8NI77 898 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 STAG3L4Q8TBR4 150 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 CPT1CQ8TCG5 803 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 PPP4R1Q8TF05 950 aa19.51■□□□□ 0.71
VPS28-206ENST00000526734 THOC3Q96J01 351 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms