RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SNRPD1P62314 119 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 AP2B1P63010 937 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 MRPS25P82663 173 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 SRSF1Q07955 248 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP48-211ENST00000526044 BLMHQ13867 455 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ZNF234Q14588 700 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ZNF235Q14590 738 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TRIP13Q15645 432 aaPredicted RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 MYLK3Q32MK0 819 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TBRG1Q3YBR2 411 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 CCDC38Q502W7 563 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 CARD16Q5EG05 197 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 FAM182AQ5T1J6 154 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ITPRIPL1Q6GPH6 555 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 NCEH1Q6PIU2 408 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 KLHL17Q6TDP4 642 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ZNF793Q6ZN11 406 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 RAB11FIP2Q7L804 512 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TRMT11Q7Z4G4 463 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 PRUNE1Q86TP1 453 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SLC44A2Q8IWA5 706 aaPredicted RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 LMNTD2Q8IXW0 634 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 PGBD5Q8N414 524 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 PCDH20Q8N6Y1 951 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 HDAC2Q92769 488 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 SLCO2A1Q92959 643 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SH3KBP1Q96B97 665 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 LRRC45Q96CN5 670 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 RTP4Q96DX8 246 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 PPP1R2P1Q96PQ5 205 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 NUDCD1Q96RS6 583 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ACOX2Q99424 681 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SEMA3CQ99985 751 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 CHCHD6Q9BRQ6 235 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SLC25A51Q9H1U9 297 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TMEM245Q9H330 911 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 MFSD1Q9H3U5 465 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 PAPOLBQ9NRJ5 636 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 PAK5Q9P286 719 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 RSPH14Q9UHP6 348 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TMCC3Q9ULS5 477 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 AAR2Q9Y312 384 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 UTP11Q9Y3A2 253 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 SNX5Q9Y5X3 404 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 HS3ST3B1Q9Y662 390 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 STON1Q9Y6Q2 735 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 CACNA1IQ9P0X4 2223 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 MYO18AQ92614 2054 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 C5orf42Q9H799 3197 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 COL4A2P08572 1712 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SZT2Q5T011 3432 aa4.4□□□□□ -1.7
USP48-211ENST00000526044 EDDM13A0A1B0GTR0 161 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 A0A1W2PQ67 120 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ANTXRLA6NF34 631 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 MBD3L5A6NJ08 208 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 SHISA7A6NL88 538 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 E7EVH7 732 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 EIF3FO00303 357 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 TRIM38O00635 465 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 NDC80O14777 642 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 INSIG1O15503 277 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 RAD51CO43502 376 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 DCXO43602 365 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 UGDHO60701 494 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 RNASEH1O60930 286 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 ZNF821O75541 412 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 ANXA9O76027 345 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 METTL18O95568 372 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 KLF8O95600 359 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 IGSF6O95976 241 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 GSRP00390 522 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 HLA-DQB2P05538 268 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 SERPINF2P08697 491 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PEPDP12955 493 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 HLA-EP13747 358 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 CNTFP26441 200 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 FDFT1P37268 417 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 CD86P42081 329 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 TNNT3P45378 269 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 DRG2P55039 364 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 GEMP55040 296 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 MAXP61244 160 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 SARNPP82979 210 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 SHC2P98077 582 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 B4GALNT1Q00973 533 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 BCL2L1Q07817 233 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 SIGLEC14Q08ET2 396 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 NIPAL4Q0D2K0 466 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ZBTB17Q13105 803 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 CALCOCO2Q13137 446 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ENPP2Q13822 863 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PTK6Q13882 451 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 TWIST1Q15672 202 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 HNRNPA1L2Q32P51 320 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 EOGTQ5NDL2 527 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 C9orf64Q5T6V5 341 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 C8orf74Q6P047 294 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 C22orf39Q6P5X5 142 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ZNF449Q6P9G9 518 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms