RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 OR4D6Q8NGJ1 314 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 BSCL2Q96G97 398 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 ZNF641Q96N77 438 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 CDK15Q96Q40 435 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 PRMT8Q9NR22 394 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 UBE2J1Q9Y385 318 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 PCDHB14Q9Y5E9 798 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 MROH2AA6NES4 1674 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 NPIPA7E9PJI5 369 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 DNM1LO00429 736 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 CD3GP09693 182 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 NPIPA8P0DM63 369 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 NR2C1P13056 603 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 AFF3P51826 1226 aaKnown RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 PPA1Q15181 289 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 PGM2L1Q6PCE3 622 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 MRPL41Q8IXM3 137 aaKnown RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 GTPBP8Q8N3Z3 284 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 PNPLA2Q96AD5 504 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 EPYCQ99645 322 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 SIRPGQ9P1W8 387 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 TLR6Q9Y2C9 796 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 GRXCR1A8MXD5 290 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 SCDO00767 359 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 SCGB1D1O95968 90 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 C1RP00736 705 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 MAT2AP31153 395 aaKnown RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 BMP8BP34820 402 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 TMEM119Q4V9L6 283 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 BMP8AQ7Z5Y6 402 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 ZNF283Q8N7M2 679 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 DGAT2Q96PD7 388 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 TMEM209Q96SK2 561 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 TUBA1CQ9BQE3 449 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 TMEM109Q9BVC6 243 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
LRRK1-202ENST00000525284 TFB2MQ9H5Q4 396 aaKnown RBP13.3□□□□□ -0.28
LRRK1-202ENST00000525284 RBM47A0AV96 593 aaKnown RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 NT5C1B-RDH14C9J2C7 533 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 AKR1A1P14550 325 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 EVI2BP34910 448 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 SLC35F1Q5T1Q4 408 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 RRAGCQ9HB90 399 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 TRBC2A0A5B9 178 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 DUXAA6NLW8 204 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 AGPSO00116 658 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 PDHXO00330 501 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 ADH1AP07327 375 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 FABP6P51161 128 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 FADDQ13158 208 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 TMPRSS7Q7RTY8 843 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 WDSUB1Q8N9V3 476 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 PRMT6Q96LA8 375 aaPredicted RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 OR2B2Q9GZK3 357 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 A0A0J9YVX5 310 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 FSCN2O14926 492 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 DIRAS1O95057 198 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 PRKXP51817 358 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 GALNT10Q86SR1 603 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 OR4K17Q8NGC6 315 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 GEMIN6Q8WXD5 167 aaKnown RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 B3GALT1Q9Y5Z6 326 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 SGCEO43556 437 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 MVKQ03426 396 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 NOMO2Q5JPE7 1267 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 GLT8D1Q68CQ7 371 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 OR10Q1Q8NGQ4 319 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 PLA2G12BQ9BX93 195 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 FAIMQ9NVQ4 179 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 ZNF510Q9Y2H8 683 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 A8MXE2 369 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 AGPAT2O15120 278 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 MFSD11O43934 449 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 MT-ND5P03915 603 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 DLDP09622 509 aaKnown RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 RPS12P25398 132 aaKnown RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 ADORA2AP29274 412 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 FGL1Q08830 312 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 ACSBG2Q5FVE4 666 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
LRRK1-202ENST00000525284 CANT1Q8WVQ1 401 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 SDSLQ96GA7 329 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 PCDHGA11Q9Y5H2 935 aa13.29□□□□□ -0.28
LRRK1-202ENST00000525284 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
LRRK1-202ENST00000525284 GRIN3BO60391 1043 aa13.28□□□□□ -0.28
LRRK1-202ENST00000525284 NMBRP28336 390 aa13.28□□□□□ -0.28
LRRK1-202ENST00000525284 NKX2-5P52952 324 aaPredicted RBP13.28□□□□□ -0.28
LRRK1-202ENST00000525284 PNLIPRP1P54315 467 aa13.28□□□□□ -0.28
LRRK1-202ENST00000525284 ZNF829Q3KNS6 432 aaPredicted RBP13.28□□□□□ -0.28
LRRK1-202ENST00000525284 C12orf40Q86WS4 652 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms