RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 ZC3H7AQ8IWR0 971 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 CTAGE4Q8IX94 777 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 AMER2Q8N7J2 671 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 RBMXL3Q8N7X1 1067 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 MNS1Q8NEH6 495 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 EXT2Q93063 718 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 ESAMQ96AP7 390 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 RHBDF1Q96CC6 855 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 SMAD5Q99717 465 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZNF552Q9H707 407 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZBTB20Q9HC78 741 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZNF160Q9HCG1 818 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 MKKSQ9NPJ1 570 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 NINJ2Q9NZG7 142 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 PLAAQ9Y263 795 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 MAP4K5Q9Y4K4 846 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 TENM4Q6N022 2769 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR2W5A6NFC9 320 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 TTLL8A6PVC2 850 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 MAP2K7O14733 419 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 TAPBPO15533 448 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 NDUFS4O43181 175 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 DPM1O60762 260 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 DNAJB6O75190 326 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 RDH16O75452 317 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 NSA2O95478 260 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC35G6P0C7Q6 338 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 ACPPP15309 386 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 HNF4AP41235 474 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 KCNC1P48547 511 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 HNMTP50135 292 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 CSRP3P50461 194 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 EFNA3P52797 238 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 EEF1A2Q05639 463 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 Q0VFX4 171 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 DLG1Q12959 904 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 BMPR2Q13873 1038 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 RBBP5Q15291 538 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZKSCAN8Q15776 578 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 UAP1Q16222 522 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 MFSD4BQ5TF39 518 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 VWA5B1Q5TIE3 1220 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 ATG9BQ674R7 924 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 PDSS2Q86YH6 399 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 NACC2Q96BF6 587 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 TMEM79Q9BSE2 394 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 ANKHQ9HCJ1 492 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 WWOXQ9NZC7 414 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 CD274Q9NZQ7 290 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 MKL2Q9ULH7 1088 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 NAALAD2Q9Y3Q0 740 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 PCDHGB7Q9Y5F8 929 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 KCNE2Q9Y6J6 123 aa12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 HELZ2Q9BYK8 2649 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-205ENST00000525079 H0YIG0 161 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 KLHL18O94889 574 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 BMP10O95393 424 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 CXCR2P25025 360 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 SCTRP47872 440 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC6A12P48065 614 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 HSPA7P48741 367 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 CD97P48960 835 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 SOX8P57073 446 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 ATP6V0D1P61421 351 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 FOXK1P85037 733 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 REEP5Q00765 189 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 NAB1Q13506 487 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 MROH9Q5TGP6 573 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 JMJD6Q6NYC1 403 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 TBC1D19Q8N5T2 526 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 ANKRD53Q8N9V6 530 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR5T3Q8NGG3 340 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR51Q1Q8NH59 317 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 THOC3Q96J01 351 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 UBXN10Q96LJ8 280 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 AIF1LQ9BQI0 150 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 SARGQ9BW04 601 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 CLMPQ9H6B4 373 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 ALG9Q9H6U8 611 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 PELI2Q9HAT8 420 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 C5AR2Q9P296 337 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 MTRF1LQ9UGC7 380 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 RNF112Q9ULX5 631 aa12.16□□□□□ -0.46
TRAPPC4-205ENST00000525079 NSG1A0A0A6YYJ2 146 aa12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 H2AFYO75367 372 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 ACSL3O95573 720 aa12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 HPP00738 406 aa12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 TUBB4AP04350 444 aa12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 ALPPP05187 535 aa12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 CELA2AP08217 269 aa12.15□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZNF888P0CJ79 500 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms