RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	DCAF12L2	Q5VW00	463 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	LRIG3	Q6UXM1	1119 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	DET1	Q7L5Y6	550 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	G2E3	Q7L622	706 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	ZDHHC23	Q8IYP9	409 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	ZCCHC9	Q8N567	271 aa	Known RBP	4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	ANKRD13C	Q8N6S4	541 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	RASGEF1A	Q8N9B8	481 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM185A	Q8NFB2	350 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	HUS1B	Q8NHY5	278 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	SELENOM	Q8WWX9	145 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	C16orf58	Q96GQ5	468 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	KAZALD1	Q96I82	304 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	SPATA33	Q96N06	139 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	FRG2B	Q96QU4	278 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	DDO	Q99489	341 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	CCDC77	Q9BR77	488 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	MXRA8	Q9BRK3	442 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	ABHD14A	Q9BUJ0	271 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	TPPP3	Q9BW30	176 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	NFKBIZ	Q9BYH8	718 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	POLR1E	Q9GZS1	481 aa	Known RBP	4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	EGLN1	Q9GZT9	426 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM117	Q9H0C3	514 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	C11orf49	Q9H6J7	331 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	YY1AP1	Q9H869	796 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	RMND5A	Q9H871	391 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.1	□□□□□ -1.75	7e-8	■■□□□ 13.1
PCM1-223	ENST00000524356	COPG2	Q9UBF2	871 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	KCNN3	Q9UGI6	736 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	MAD2L2	Q9UI95	211 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	RCOR1	Q9UKL0	485 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	PRDM4	Q9UKN5	801 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	MRPL11	Q9Y3B7	192 aa	Known RBP	4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	TTC41P	Q6P2S7	1318 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	WDR19	Q8NEZ3	1342 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356	MYO3B	Q8WXR4	1341 aa		4.1	□□□□□ -1.75
PCM1-223	ENST00000524356		A0A087WZY1	265 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	ANKDD1B	A6NHY2	528 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	SSX5	O60225	188 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	PGLS	O95336	258 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	PAH	P00439	452 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	CXCL10	P02778	98 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	ICAM1	P05362	532 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	UGT1A6	P19224	532 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	NR1D1	P20393	614 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TGM2	P21980	687 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	CORO1A	P31146	461 aa	Known RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	MAGEB1	P43366	347 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	VPS41	P49754	854 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	PPP2R2B	Q00005	443 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	SORD	Q00796	357 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	HSPB3	Q12988	150 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	PDE7A	Q13946	482 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	KRT33B	Q14525	404 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	LARS2	Q15031	903 aa	Known RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	CCL14	Q16627	93 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	AWAT1	Q58HT5	328 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	KCTD11	Q693B1	232 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	WBP2NL	Q6ICG8	309 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	PAPD4	Q6PIY7	484 aa	Known RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	DPPA4	Q7L190	304 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TAS2R42	Q7RTR8	314 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TRIM74	Q86UV6	250 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TRIM73	Q86UV7	250 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM173	Q86WV6	379 aa	Predicted RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	ZBTB2	Q8N680	514 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	OR4N2	Q8NGD1	307 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	MPLKIP	Q8TAP9	179 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TRIB2	Q92519	343 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	MSI2	Q96DH6	328 aa	Known RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	MS4A10	Q96PG2	267 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	TEFM	Q96QE5	360 aa	Known RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	NUDCD1	Q96RS6	583 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	ZNF347	Q96SE7	839 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	IFT27	Q9BW83	186 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	FANCE	Q9HB96	536 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	BPIFA1	Q9NP55	256 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	KLHL1	Q9NR64	748 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	ASNSD1	Q9NWL6	643 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	SLCO1C1	Q9NYB5	712 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	DBF4	Q9UBU7	674 aa	Predicted RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	RNF150	Q9ULK6	438 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	FZD4	Q9ULV1	537 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	CDC14A	Q9UNH5	594 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	SNX6	Q9UNH7	406 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	GPR132	Q9UNW8	380 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	HBS1L	Q9Y450	684 aa	Known RBP	4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	UBE4B	O95155	1302 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	MROH5	Q6ZUA9	1318 aa		4.09	□□□□□ -1.75
PCM1-223	ENST00000524356	LAMB4	A4D0S4	1761 aa		4.09	□□□□□ -1.76
PCM1-223	ENST00000524356	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	IGLV5-39	A0A0G2JS06	123 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356		A0A0U1RQF3	1178 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	GOLGA6L7	A0A1B0GV03	622 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM230A	A0A1W2PPH8	454 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CPED1	A4D0V7	1026 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	HNRNPCL2	B2RXH8	293 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms