RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 HAO1Q9UJM8 370 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 ZNF490Q9ULM2 529 aaPredicted RBP11.41□□□□□ -0.58
PVT1-215ENST00000522963 BTRCQ9Y297 605 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 RAP2CQ9Y3L5 183 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 TIMM22Q9Y584 194 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 PCDHGA7Q9Y5G6 932 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 PCM1Q15154 2024 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 ANKRD11Q6UB99 2663 aaPredicted RBP11.41□□□□□ -0.58
PVT1-215ENST00000522963 FRYQ5TBA9 3013 aa11.41□□□□□ -0.58
PVT1-215ENST00000522963 USP24Q9UPU5 2620 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 A0A0J9YVX5 310 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 TRBC2A0A5B9 178 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 TMEM233B4DJY2 109 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 B4E171 279 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 H0YIV9 168 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 FFAR3O14843 346 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 AZIN1O14977 448 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 POLR1CO15160 346 aaPredicted RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 GPR42O15529 346 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 HCRTR1O43613 425 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 OR1F1O43749 312 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 ENO1P06733 434 aaKnown RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 FGF4P08620 206 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 NELFEP18615 380 aaKnown RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 CXCR2P25025 360 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 SERPINB3P29508 390 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 GRK3P35626 688 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 TSPAN7P41732 249 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 GABRA4P48169 554 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 HSD11B2P80365 405 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 MC2RQ01718 297 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 RELAQ04206 551 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 RBBP5Q15291 538 aaKnown RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 TGIF1Q15583 401 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 HIST2H2ACQ16777 129 aaPredicted RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 DEFB110Q30KQ9 67 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 PAGE2BQ5JRK9 111 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 CLEC6AQ6EIG7 209 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 HIST2H2AA3Q6FI13 130 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 ADNP2Q6IQ32 1131 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 MED27Q6P2C8 311 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 TMIGD1Q6UXZ0 262 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 CEACAM20Q6UY09 585 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 FAM47EQ6ZV65 393 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 KMT5CQ86Y97 462 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.4□□□□□ -0.58
PVT1-215ENST00000522963 LAS2Q8IYD9 372 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 CLYBLQ8N0X4 340 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 D2HGDHQ8N465 521 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 BMPERQ8N8U9 685 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 ANKRD53Q8N9V6 530 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 OR7G3Q8NG95 312 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 METTL6Q8TCB7 284 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 AGR3Q8TD06 166 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 MAGEB10Q96LZ2 347 aaPredicted RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 C7orf26Q96N11 449 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 ZFYVE21Q9BQ24 234 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 SARGQ9BW04 601 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 SLC29A3Q9BZD2 475 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 CHRNA10Q9GZZ6 450 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 ILKAPQ9H0C8 392 aaPredicted RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 NT5DC2Q9H857 520 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 PDE7BQ9NP56 450 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 PNPOQ9NVS9 261 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.4□□□□□ -0.58
PVT1-215ENST00000522963 FIS1Q9Y3D6 152 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 TRAF6Q9Y4K3 522 aa11.4□□□□□ -0.58
PVT1-215ENST00000522963 LOC105369274A0A096LPK9 316 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 LOC102723532A0A0G2JNH3 316 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 MANBAO00462 879 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 MAP3K7O43318 606 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 CRCPO75575 148 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 SNUPNO95149 360 aaKnown RBP11.39□□□□□ -0.59
PVT1-215ENST00000522963 CTSBP07858 339 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 UROSP10746 265 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 PCNAP12004 261 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 FOLR1P15328 257 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 HMOX2P30519 316 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 HTR6P50406 440 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 NEK2P51955 445 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 RAB15P59190 212 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 RPS15AP62244 130 aaKnown RBP11.39□□□□□ -0.59
PVT1-215ENST00000522963 TUBB3Q13509 450 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 GPR19Q15760 415 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 UGT3A2Q3SY77 523 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 SGO1Q5FBB7 561 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 TMTC4Q5T4D3 741 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 BROXQ5VW32 411 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 KANK2Q63ZY3 851 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 FRMPD2BQ6IN97 320 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 VN1R5Q7Z5H4 357 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 VN1R4Q7Z5H5 301 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 MCATQ8IVS2 390 aaKnown RBP11.39□□□□□ -0.59
PVT1-215ENST00000522963 SPACA3Q8IXA5 215 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 OR4N4Q8N0Y3 316 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 RNF175Q8N4F7 328 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 MFSD9Q8NBP5 474 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 WDR20Q8TBZ3 569 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms