RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EXOC3L2Q2M3D2 409 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 KLHL40Q2TBA0 621 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SPDYE7PQ495Y7 208 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 PLAC9Q5JTB6 97 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SEL1L3Q68CR1 1132 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 LAIR1Q6GTX8 287 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 OGFOD2Q6N063 350 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 KCNV1Q6PIU1 500 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 MPZL3Q6UWV2 235 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SYT10Q6XYQ8 523 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 BZW1Q7L1Q6 419 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 CCDC60Q8IWA6 550 aaPredicted RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 KATNAL2Q8IYT4 538 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 FAM47BQ8NA70 645 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SLC38A9Q8NBW4 561 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 ENGASEQ8NFI3 743 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 PNPT1Q8TCS8 783 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 EMG1Q92979 244 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 RFT1Q96AA3 541 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 ZNF503Q96F45 646 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 HMCESQ96FZ2 354 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 P2RY11Q96G91 374 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 LCORQ96JN0 433 aaPredicted RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 CATSPER2Q96P56 530 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 MNTQ99583 582 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 CHP1Q99653 195 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 LMF2Q9BU23 707 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 FSD1LQ9BXM9 530 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 LHPPQ9H008 270 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 IQCGQ9H095 443 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 TDRD3Q9H7E2 651 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 MEAF6Q9HAF1 191 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 IL17RBQ9NRM6 502 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 PHPT1Q9NRX4 125 aaPredicted RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 PSORS1C1Q9UIG5 152 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 FZD10Q9ULW2 581 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 ADAMTS5Q9UNA0 930 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 B9D1Q9UPM9 204 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 IFT52Q9Y366 437 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SLCO1B1Q9Y6L6 691 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 ZNF536O15090 1300 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PRSS51A0A1B0GVH4 220 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 TTC26A0AVF1 554 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 HEATR9A2RTY3 570 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ZNF503-AS2A6NEH8 195 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 AHRRA9YTQ3 701 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 FOXE1O00358 373 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 SDHDO14521 159 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 RRHO14718 337 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 EXTL3O43909 919 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ACSL4O60488 711 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 LPXNO60711 386 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CDH16O75309 829 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 TRIM3O75382 744 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 DDNO94850 711 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 PIGNO95427 931 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CBSLP0DN79 551 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PNMTP11086 282 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 HPGDP15428 266 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ZNF44P15621 663 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ST6GAL1P15907 406 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PCMT1P22061 227 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ANXA13P27216 316 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 DCTDP32321 178 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CBSP35520 551 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 RPS19P39019 145 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 APOBEC1P41238 236 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 MAGEA11P43364 429 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ME1P48163 572 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 LEPRP48357 1165 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 TNFSF10P50591 281 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PPT1P50897 306 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 NLRP11P59045 1033 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 BNC1Q01954 994 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 FAM27E3Q08E93 113 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 MAD2L1Q13257 205 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 STX1AQ16623 288 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 POM121L1PQ3SYA9 428 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 HIKESHIQ53FT3 197 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 AGKQ53H12 422 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 AGBL2Q5U5Z8 902 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 NKAIN2Q5VXU1 208 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 ZNF772Q68DY9 489 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 RGMBQ6NW40 437 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 NIPAL3Q6P499 406 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 VWA1Q6PCB0 445 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 DEGS2Q6QHC5 323 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 BLOC1S2Q6QNY1 142 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 OLFML1Q6UWY5 402 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PACS1Q6VY07 963 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CCDC80Q76M96 950 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 DGLUCYQ7Z3D6 616 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 C1orf210Q8IVY1 113 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 TDHQ8IZJ6 230 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 BEST3Q8N1M1 668 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 EMC1Q8N766 993 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 TRIML2Q8N7C3 387 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 OR5M8Q8NGP6 311 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 TRMT10AQ8TBZ6 339 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms