RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ITGAMP11215 1152 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 TSFMP43897 325 aaKnown RBP19.58■□□□□ 0.72
SDCBP-209ENST00000522243 XCR1P46094 333 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 RPL21P46778 160 aaKnown RBP19.58■□□□□ 0.72
SDCBP-209ENST00000522243 CCR8P51685 355 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 ARG2P78540 354 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 MGAT5Q09328 741 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 LANCL3Q6ZV70 420 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 PDSS2Q86YH6 399 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 OR1N1Q8NGS0 311 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 OR56A3Q8NH54 315 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 METTL21AQ8WXB1 218 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 ANP32BQ92688 251 aaKnown RBP19.58■□□□□ 0.72
SDCBP-209ENST00000522243 FBXL8Q96CD0 374 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 MOCOSQ96EN8 888 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 BARD1Q99728 777 aaKnown RBP19.58■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF700Q9H0M5 742 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 ANKHQ9HCJ1 492 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 ERRFI1Q9UJM3 462 aaPredicted RBP19.58■□□□□ 0.72
SDCBP-209ENST00000522243 FAM95CA0A1B0GW59 222 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 A1L4Q6 167 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF860A6NHJ4 632 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 OR1F1O43749 312 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 RDH16O75452 317 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 SERPIND1P05546 499 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 SOX11P35716 441 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 AP1S2P56377 157 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF460Q14592 562 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 CATSPEREQ5SY80 951 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 CAPN12Q6ZSI9 719 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 STRA8Q7Z7C7 330 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 RBCK1Q9BYM8 510 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 SPNS1Q9H2V7 528 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 PLEKHB1Q9UF11 243 aaPredicted RBP19.57■□□□□ 0.72
SDCBP-209ENST00000522243 SCN2AQ99250 2005 aa19.57■□□□□ 0.72
SDCBP-209ENST00000522243 CPAMD8Q8IZJ3 1885 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 DYTNA2CJ06 578 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 NPEPPSL1A6NEC2 478 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 CDC7O00311 574 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 PCDH17O14917 1159 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 PIAS1O75925 651 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 SEC24DO94855 1032 aaPredicted RBP19.56■□□□□ 0.72
SDCBP-209ENST00000522243 SLC35G6P0C7Q6 338 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF37AP17032 561 aaPredicted RBP19.56■□□□□ 0.72
SDCBP-209ENST00000522243 SBSNQ6UWP8 590 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 ZC3HC1Q86WB0 502 aaKnown RBP19.56■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF740Q8NDX6 193 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 ABHD11Q8NFV4 315 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 ATL1Q8WXF7 558 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 PDLIM2Q96JY6 352 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 IMMP1LQ96LU5 166 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 TSNARE1Q96NA8 513 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 CYTH2Q99418 400 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 NAALAD2Q9Y3Q0 740 aa19.56■□□□□ 0.72
SDCBP-209ENST00000522243 COL12A1Q99715 3063 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 E7ESA3 106 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 NDUFS4O43181 175 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 B3GALT4O96024 378 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 ENO2P09104 434 aaPredicted RBP19.55■□□□□ 0.72
SDCBP-209ENST00000522243 TAS2R39P59534 338 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 FRG1Q14331 258 aaKnown RBP19.55■□□□□ 0.72
SDCBP-209ENST00000522243 RIPOR1Q6ZS17 1223 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 CPEB2Q7Z5Q1 589 aaKnown RBP19.55■□□□□ 0.72
SDCBP-209ENST00000522243 ZBED8Q8IZ13 594 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 ST6GALNAC3Q8NDV1 305 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 OR4K1Q8NGD4 311 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 OR5T3Q8NGG3 340 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 FAR1Q8WVX9 515 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 SLC5A11Q8WWX8 675 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 NEIL2Q969S2 332 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 PEX11GQ96HA9 241 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 PDLIM5Q96HC4 596 aaKnown RBP19.55■□□□□ 0.72
SDCBP-209ENST00000522243 MAGEB10Q96LZ2 347 aaPredicted RBP19.55■□□□□ 0.72
SDCBP-209ENST00000522243 TUBB6Q9BUF5 446 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 DPH5Q9H2P9 285 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 SMYD2Q9NRG4 433 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 MOCS1Q9NZB8 636 aa19.55■□□□□ 0.72
SDCBP-209ENST00000522243 TRBC2A0A5B9 178 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 E2F3O00716 465 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 DNAJB6O75190 326 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 CDC123O75794 336 aaPredicted RBP19.54■□□□□ 0.72
SDCBP-209ENST00000522243 OLR1P78380 273 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 CSHL1Q14406 222 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 PPP1R3AQ16821 1122 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 C4orf17Q53FE4 359 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 ANKRD37Q7Z713 158 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 THOC6Q86W42 341 aaKnown RBP19.54■□□□□ 0.72
SDCBP-209ENST00000522243 ANKRD49Q8WVL7 239 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 FAM129AQ9BZQ8 928 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 UNKQ9C0B0 810 aaKnown RBP19.54■□□□□ 0.72
SDCBP-209ENST00000522243 RNF14Q9UBS8 474 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 DYRK1BQ9Y463 629 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 SLC22A7Q9Y694 548 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 ICE1Q9Y2F5 2266 aa19.54■□□□□ 0.72
SDCBP-209ENST00000522243 WDPCPO95876 746 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 ICAM2P13598 275 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 TNFSF10P50591 281 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 BTBD16Q32M84 506 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 FAM180AQ6UWF9 173 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 TMPRSS11BQ86T26 416 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms