RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CLCA1A8K7I4 914 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 WDR47O94967 919 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 HEXIM1O94992 359 aaKnown RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 THRAP10827 490 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 GP1BBP13224 206 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 CTPS1P17812 591 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 ERCC2P18074 760 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 EEF1GP26641 437 aaKnown RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 TACR3P29371 465 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 GPR1P46091 355 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 AIF1P55008 147 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 GSCP56915 257 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 UBE2HP62256 183 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 CDK3Q00526 305 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 HSF1Q00613 529 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 OGDHQ02218 1023 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 ID2Q02363 134 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 IL10RBQ08334 325 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 SLC10A7Q0GE19 358 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 TRA2AQ13595 282 aaKnown RBP eCLIP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 NR1D2Q14995 579 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 CLPPQ16740 277 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 PPP6R3Q5H9R7 873 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 C10orf25Q5T742 122 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 ATP1A1-AS1Q5TC04 95 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 RAET1GQ6H3X3 334 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 TMEM71Q6P5X7 295 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 DEF8Q6ZN54 512 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 RFLNAQ6ZTI6 216 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 MON1BQ7L1V2 547 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 TIPARPQ7Z3E1 657 aaKnown RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 KDELC2Q7Z4H8 507 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 HSD11B1LQ7Z5J1 315 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 ARHGAP12Q8IWW6 846 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 C9orf106Q8NAJ2 232 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 OR4D9Q8NGE8 314 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 C9orf43Q8TAL5 461 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 DTD2Q96FN9 168 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 SLC45A3Q96JT2 553 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 CATSPER2Q96P56 530 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 SIGLEC11Q96RL6 698 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 AGPAT1Q99943 283 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 DDA1Q9BW61 102 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 ADGRE3Q9BY15 652 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 FRMD8Q9BZ67 464 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 GPN2Q9H9Y4 310 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-216ENST00000520868 DONSONQ9NYP3 566 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 ANAPC2Q9UJX6 822 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 PILRAQ9UKJ1 303 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 CORO2BQ9UQ03 480 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 MAN2B2Q9Y2E5 1009 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 SCN8AQ9UQD0 1980 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 LRRK1Q38SD2 2015 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 SDK2Q58EX2 2172 aa5.72□□□□□ -1.49
PABPC1-216ENST00000520868 SPTAN1Q13813 2472 aaKnown RBP5.71□□□□□ -1.49
PABPC1-216ENST00000520868 TMCO5BA8MYB1 307 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 B4E171 279 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 EML2O95834 649 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 DESP17661 470 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TCN2P20062 427 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 NR1D1P20393 614 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TNFAIP3P21580 790 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 PSMA2P25787 234 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 OAS2P29728 719 aaKnown RBP5.71□□□□□ -1.5
PABPC1-216ENST00000520868 HTR7P34969 479 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TSPAN7P41732 249 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 MAPK9P45984 424 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 MLLT10P55197 1068 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 MAXP61244 160 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 AP1S1P61966 158 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 RPS13P62277 151 aaKnown RBP5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ZNF91Q05481 1191 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 CDC20Q12834 499 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TRAF2Q12933 501 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 NFATC2Q13469 925 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 PEX6Q13608 980 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ZNF235Q14590 738 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 RFTN1Q14699 578 aaPredicted RBP5.71□□□□□ -1.5
PABPC1-216ENST00000520868 KRT31Q15323 416 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 RBMS2Q15434 407 aaKnown RBP5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TWIST1Q15672 202 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ERMARDQ5T6L9 678 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 HIST2H2BCQ6DN03 193 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ACAD10Q6JQN1 1059 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 RFX8Q6ZV50 586 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TSPAN33Q86UF1 283 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 TRIM74Q86UV6 250 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 MCOLN2Q8IZK6 566 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ARFGAP1Q8N6T3 406 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 NPWQ8N729 165 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 NEK11Q8NG66 645 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 SUN3Q8TAQ9 357 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 SLC37A2Q8TED4 501 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ABHD5Q8WTS1 349 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 APOBEC4Q8WW27 367 aaKnown RBP5.71□□□□□ -1.5
PABPC1-216ENST00000520868 NCSTNQ92542 709 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 KIAA1143Q96AT1 154 aaPredicted RBP5.71□□□□□ -1.5
PABPC1-216ENST00000520868 ZBTB9Q96C00 473 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 AP2M1Q96CW1 435 aa5.71□□□□□ -1.5
PABPC1-216ENST00000520868 RTP4Q96DX8 246 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms