RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TCAIMQ8N3R3 496 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 GALNT16Q8N428 558 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 MFSD9Q8NBP5 474 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ZNF740Q8NDX6 193 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 C8orf44Q96CB5 159 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 MCMBPQ9BTE3 642 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 NUDT9Q9BW91 350 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 SLC26A1Q9H2B4 701 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CNOT10Q9H9A5 744 aaKnown RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 MKKSQ9NPJ1 570 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ATP13A2Q9NQ11 1180 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 C14orf105Q9NVL8 296 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 LUZP4Q9P127 313 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ANAPC2Q9UJX6 822 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ZNF451Q9Y4E5 1061 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 SUV39H1O43463 412 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 FOXS1O43638 330 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 LTA4HP09960 611 aaKnown RBP13.45□□□□□ -0.26
VEGFA-221ENST00000520265 VARSP26640 1264 aaKnown RBP13.45□□□□□ -0.26
VEGFA-221ENST00000520265 GLRBP48167 497 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 SERPINB8P50452 374 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 TLE1Q04724 770 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 CDC16Q13042 620 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 FAM53BQ14153 422 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 ZKSCAN8Q15776 578 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-221ENST00000520265 ZXDCQ2QGD7 858 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-221ENST00000520265 UBAP2Q5T6F2 1119 aaKnown RBP13.45□□□□□ -0.26
VEGFA-221ENST00000520265 KLC3Q6P597 504 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 NXPE4Q6UWF7 544 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 AMER3Q8N944 861 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 KCTD4Q8WVF5 259 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 ESAMQ96AP7 390 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 VPS11Q9H270 941 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 SPNS1Q9H2V7 528 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 PELI2Q9HAT8 420 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 NMRAL1Q9HBL8 299 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 SNX15Q9NRS6 342 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 NFU1Q9UMS0 254 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 ACOT9Q9Y305 439 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 MAP4K5Q9Y4K4 846 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 HS3ST3B1Q9Y662 390 aa13.45□□□□□ -0.26
VEGFA-221ENST00000520265 KCNE1BA0A087WTH5 132 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 A0A087X1B8 175 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 IDSB3KWA1 339 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 DPM1O60762 260 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 KLHL18O94889 574 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 SLC35E2BP0CK96 405 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 GNAZP19086 355 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 TYK2P29597 1187 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 SKP1P63208 163 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 REEP5Q00765 189 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 IRF9Q00978 393 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 AIMP2Q13155 320 aaKnown RBP13.44□□□□□ -0.26
VEGFA-221ENST00000520265 SLBPQ14493 270 aaKnown RBP eCLIP13.44□□□□□ -0.26
VEGFA-221ENST00000520265 DEFB134Q4QY38 66 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 TOR1AIP1Q5JTV8 583 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 SULT1C3Q6IMI6 304 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 TMEM214Q6NUQ4 689 aaKnown RBP13.44□□□□□ -0.26
VEGFA-221ENST00000520265 ABHD13Q7L211 337 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 LAPTM4BQ86VI4 370 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 STAG3L4Q8TBR4 150 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 METTL21AQ8WXB1 218 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 KIAA1191Q96A73 305 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 NXNL1Q96CM4 212 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 MOCOSQ96EN8 888 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 MAGEB10Q96LZ2 347 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-221ENST00000520265 EPN3Q9H201 632 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 ACSS3Q9H6R3 686 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 ZNF160Q9HCG1 818 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 ENAMQ9NRM1 1142 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 DNAJC11Q9NVH1 559 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 NAALAD2Q9Y3Q0 740 aa13.44□□□□□ -0.26
VEGFA-221ENST00000520265 PCDHGA9Q9Y5G4 932 aaKnown RBP13.44□□□□□ -0.26
VEGFA-221ENST00000520265 SPTA1P02549 2419 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 A0A096LPK6 155 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 NSG1A0A0A6YYJ2 146 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 URADA6NGE7 173 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 TTLL8A6PVC2 850 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 UBXN8O00124 270 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 SOCS6O14544 535 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 JRKO75564 520 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 STK16O75716 305 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 CDC123O75794 336 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 IPO13O94829 963 aaKnown RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 NSA2O95478 260 aaKnown RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 ONECUT2O95948 504 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 C1QAP02745 245 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 ZNF888P0CJ79 500 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 GFAPP14136 432 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 ARL1P40616 181 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 SLC26A3P40879 764 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 MSH2P43246 934 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 XCR1P46094 333 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms