RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PWP1Q13610 501 aa17■□□□□ 0.31
SDC2-205ENST00000520233 TCTE1Q5JU00 501 aa17■□□□□ 0.31
SDC2-205ENST00000520233 TCHHL1Q5QJ38 904 aaPredicted RBP17■□□□□ 0.31
SDC2-205ENST00000520233 MANEAQ5SRI9 462 aa17■□□□□ 0.31
SDC2-205ENST00000520233 FAM219BQ5XKK7 198 aa17■□□□□ 0.31
SDC2-205ENST00000520233 ADNP2Q6IQ32 1131 aa17■□□□□ 0.31
SDC2-205ENST00000520233 RNF165Q6ZSG1 346 aa17■□□□□ 0.31
SDC2-205ENST00000520233 RAB11FIP2Q7L804 512 aa17■□□□□ 0.31
SDC2-205ENST00000520233 VN1R5Q7Z5H4 357 aa17■□□□□ 0.31
SDC2-205ENST00000520233 BPHLQ86WA6 291 aaPredicted RBP17■□□□□ 0.31
SDC2-205ENST00000520233 AFAP1L2Q8N4X5 818 aa17■□□□□ 0.31
SDC2-205ENST00000520233 ZNF655Q8N720 491 aaPredicted RBP17■□□□□ 0.31
SDC2-205ENST00000520233 BMPERQ8N8U9 685 aa17■□□□□ 0.31
SDC2-205ENST00000520233 CAMKVQ8NCB2 501 aa17■□□□□ 0.31
SDC2-205ENST00000520233 OR8K5Q8NH50 307 aa17■□□□□ 0.31
SDC2-205ENST00000520233 NT5CQ8TCD5 201 aa17■□□□□ 0.31
SDC2-205ENST00000520233 CREB3L4Q8TEY5 395 aa17■□□□□ 0.31
SDC2-205ENST00000520233 SLC13A3Q8WWT9 602 aa17■□□□□ 0.31
SDC2-205ENST00000520233 SELENOMQ8WWX9 145 aa17■□□□□ 0.31
SDC2-205ENST00000520233 USP7Q93009 1102 aa17■□□□□ 0.31
SDC2-205ENST00000520233 ZNF501Q96CX3 271 aaPredicted RBP17■□□□□ 0.31
SDC2-205ENST00000520233 MTFMTQ96DP5 389 aaKnown RBP17■□□□□ 0.31
SDC2-205ENST00000520233 FAR2Q96K12 515 aa17■□□□□ 0.31
SDC2-205ENST00000520233 OR6C1Q96RD1 312 aa17■□□□□ 0.31
SDC2-205ENST00000520233 PNPOQ9NVS9 261 aa17■□□□□ 0.31
SDC2-205ENST00000520233 SERTAD3Q9UJW9 196 aa17■□□□□ 0.31
SDC2-205ENST00000520233 PPT2Q9UMR5 302 aa17■□□□□ 0.31
SDC2-205ENST00000520233 FIS1Q9Y3D6 152 aa17■□□□□ 0.31
SDC2-205ENST00000520233 LOXL2Q9Y4K0 774 aa17■□□□□ 0.31
SDC2-205ENST00000520233 DNAJC15Q9Y5T4 150 aa17■□□□□ 0.31
SDC2-205ENST00000520233 ZNF292O60281 2723 aa17■□□□□ 0.31
SDC2-205ENST00000520233 TMEM150CB9EJG8 249 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 TXNDC9O14530 226 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 EDF1O60869 148 aaKnown RBP16.99■□□□□ 0.31
SDC2-205ENST00000520233 PDYNP01213 254 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 EIF2S1P05198 315 aaKnown RBP16.99■□□□□ 0.31
SDC2-205ENST00000520233 SERPINA6P08185 405 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 SLC35G6P0C7Q6 338 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 HTR6P50406 440 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 HK2P52789 917 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 CYP4F2P78329 520 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 MC2RQ01718 297 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 FOXM1Q08050 763 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 TARDBPQ13148 414 aaKnown RBP eCLIP16.99■□□□□ 0.31
SDC2-205ENST00000520233 DDX39BQ13838 428 aaKnown RBP16.99■□□□□ 0.31
SDC2-205ENST00000520233 SGO1Q5FBB7 561 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 WASHC2DQ5SRD0 308 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 FAM47EQ6ZV65 393 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 TMPRSS7Q7RTY8 843 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 CSNK1A1LQ8N752 337 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 OR1L3Q8NH93 324 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 PIWIL2Q8TC59 973 aaKnown RBP16.99■□□□□ 0.31
SDC2-205ENST00000520233 MTERF1Q99551 399 aaKnown RBP16.99■□□□□ 0.31
SDC2-205ENST00000520233 NLNQ9BYT8 704 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 BRF2Q9HAW0 419 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 DMRT3Q9NQL9 472 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 FBXO8Q9NRD0 319 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 FARSBQ9NSD9 589 aaKnown RBP16.99■□□□□ 0.31
SDC2-205ENST00000520233 ADAMTS20P59510 1910 aa16.99■□□□□ 0.31
SDC2-205ENST00000520233 HEATR5BQ9P2D3 2071 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 PIEZO1Q92508 2521 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 MAGEB17A8MXT2 336 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 SLCO1B7G3V0H7 640 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 H3BMH7 237 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 AGRPO00253 132 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 NDUFS4O43181 175 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 OR2B3O76000 313 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 SERPIND1P05546 499 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 CTSBP07858 339 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 FGF5P12034 268 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 CCL4P13236 92 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 HSD3B1P14060 373 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 HSD3B2P26439 372 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 ITGA1P56199 1179 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 RGS1Q08116 209 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 CSTF3Q12996 717 aaKnown RBP16.98■□□□□ 0.31
SDC2-205ENST00000520233 IL11RAQ14626 422 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 ABRAXAS2Q15018 415 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 PRTGQ2VWP7 1150 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 TUBB8Q3ZCM7 444 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 MTERF4Q7Z6M4 381 aaKnown RBP16.98■□□□□ 0.31
SDC2-205ENST00000520233 GBP7Q8N8V2 638 aaPredicted RBP16.98■□□□□ 0.31
SDC2-205ENST00000520233 WDR36Q8NI36 951 aaKnown RBP16.98■□□□□ 0.31
SDC2-205ENST00000520233 TWIST2Q8WVJ9 160 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 CCT6BQ92526 530 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 CMTM7Q96FZ5 175 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 CCT7Q99832 543 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 MS4A8Q9BY19 250 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 SPRTNQ9H040 489 aaPredicted RBP16.98■□□□□ 0.31
SDC2-205ENST00000520233 PRM3Q9NNZ6 103 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 RARRES3Q9UL19 164 aa16.98■□□□□ 0.31
SDC2-205ENST00000520233 PTPRZ1P23471 2315 aaPredicted RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 FITM1A5D6W6 292 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 PLD2O14939 933 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 ZSCAN9O15535 394 aaPredicted RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 P2RX6O15547 441 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 TBX6O95947 436 aaPredicted RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 TGFB1P01137 390 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 STATHP02808 62 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 VIMP08670 466 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms