RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 FBXL8Q96CD0 374 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 C11orf24Q96F05 449 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 NRBF2Q96F24 287 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 TMEM169Q96HH4 297 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 FBXL20Q96IG2 436 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ITCHQ96J02 903 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 MAGED4Q96JG8 741 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 Q96M66 194 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 PPM1MQ96MI6 270 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SLC22A12Q96S37 553 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 COPS8Q99627 209 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 RBM4BQ9BQ04 359 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 C17orf80Q9BSJ5 609 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 RBM4Q9BWF3 364 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 ACPTQ9BZG2 426 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ZBP1Q9H171 429 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 DUSP15Q9H1R2 295 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 RMND5AQ9H871 391 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 GPN2Q9H9Y4 310 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 PALMDQ9NP74 551 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 HPS4Q9NQG7 708 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 MRPL17Q9NRX2 175 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 SPG21Q9NZD8 308 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 IFT80Q9P2H3 777 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 TBX21Q9UL17 535 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ZNF490Q9ULM2 529 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 SNX6Q9UNH7 406 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 RABL2BQ9UNT1 228 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 USP22Q9UPT9 525 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 PDE10AQ9Y233 779 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ITM2BQ9Y287 266 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 PCDHGB1Q9Y5G3 927 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 KIF26AQ9ULI4 1882 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 CEP350Q5VT06 3117 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 NUP210Q8TEM1 1887 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 DNAH12Q6ZR08 3092 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TRIM43BA6NCK2 446 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 NPIPB15A6NHN6 443 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 TTC34A8MYJ7 566 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 H3BMQ9 156 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PER2O15055 1255 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 GRM6O15303 877 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 GPR39O43194 453 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SGTAO43765 313 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PSIP1O75475 530 aaKnown RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 CREG1O75629 220 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SLCO2B1O94956 709 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CCNDBP1O95273 360 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 FKBP9O95302 570 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TRIM16O95361 564 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 POP4O95707 220 aaKnown RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 FGF19O95750 216 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 HPXP02790 462 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 GSTM1P09488 218 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CTSAP10619 480 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 JUPP14923 745 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 AMD1P17707 334 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 GPX2P18283 190 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SDC1P18827 310 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ITIH1P19827 911 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CYP2A7P20853 494 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 UGT1A1P22309 533 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 UGT1A4P22310 534 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 LHCGRP22888 699 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CRHBPP24387 322 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ACVR2AP27037 513 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CCR7P32248 378 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CD70P32970 193 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SHMT2P34897 504 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 UGT1A3P35503 534 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 UGT1A5P35504 534 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PPM1AP35813 382 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ETV3P41162 512 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 BUD31P41223 144 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 MTHFRP42898 656 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PXNP49023 591 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 CCR3P51677 355 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 DGKQP52824 942 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PNLIPRP1P54315 467 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CDH15P55291 814 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 WNT3P56703 355 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 MTPNP58546 118 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 LRRC74AQ0VAA2 488 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PMS2P3Q13401 168 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 KEAP1Q14145 624 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PTGR1Q14914 329 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 RAB39AQ14964 217 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PON2Q15165 354 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TAF12Q16514 161 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ZXDCQ2QGD7 858 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 FAM174BQ3ZCQ3 159 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 FUT11Q495W5 492 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ZNF658BQ4V348 819 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 ATP13A5Q4VNC0 1218 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CARD16Q5EG05 197 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SPANXN4Q5MJ08 99 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 C10orf62Q5T681 223 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 ZNF691Q5VV52 312 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 BROXQ5VW32 411 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 LRRC66Q68CR7 880 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms