RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.27□□□□□ -0.61
AP3B1-203ENST00000517940 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.61
AP3B1-203ENST00000517940 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 LIPJQ5W064 366 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 TMEM214Q6NUQ4 689 aaKnown RBP11.27□□□□□ -0.61
AP3B1-203ENST00000517940 FOXR1Q6PIV2 292 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 TMIGD1Q6UXZ0 262 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 GPRIN3Q6ZVF9 776 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 UBE3DQ7Z6J8 389 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 PDSS2Q86YH6 399 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 ZNF655Q8N720 491 aaPredicted RBP11.27□□□□□ -0.61
AP3B1-203ENST00000517940 CSNK1A1LQ8N752 337 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 KCT2Q8NC54 265 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 NT5CQ8TCD5 201 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
AP3B1-203ENST00000517940 SMIM10Q96HG1 83 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 TAAR9Q96RI9 348 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 DRC3Q9H069 523 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 TUBB1Q9H4B7 451 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 LHX9Q9NQ69 397 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 SLC22A11Q9NSA0 550 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 TRPS1Q9UHF7 1281 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 ZFP69BQ9UJL9 534 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 RARRES3Q9UL19 164 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 TSC22D4Q9Y3Q8 395 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 PTGDR2Q9Y5Y4 395 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 BSNQ9UPA5 3926 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 PCSK5Q92824 1860 aa11.27□□□□□ -0.61
AP3B1-203ENST00000517940 ACACAQ13085 2346 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 POLR1CO15160 346 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 NVLO15381 856 aaKnown RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZSCAN9O15535 394 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZNF749O43361 778 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 TLX3O43711 291 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 SRPX2O60687 465 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 SNNO75324 88 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 KLHL18O94889 574 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ESRRBO95718 433 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 SERPINE1P05121 402 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 JUNP05412 331 aaKnown RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 JMJD7P0C870 316 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 NR1D1P20393 614 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 SLC5A2P31639 672 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 AHRP35869 848 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 HNF4AP41235 474 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ARL4DP49703 201 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 BST1Q10588 318 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 GPS2Q13227 327 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 RBBP5Q15291 538 aaKnown RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 RBBP7Q16576 425 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 CPSF6Q16630 551 aaKnown RBP eCLIP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZC3H12BQ5HYM0 836 aaKnown RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 TMTC4Q5T4D3 741 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 CLEC6AQ6EIG7 209 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZNF517Q6ZMY9 492 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 MILR1Q7Z6M3 343 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ASPGQ86U10 573 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 CUZD1Q86UP6 607 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 PPP1R3BQ86XI6 285 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 NUDCD3Q8IVD9 361 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 AFAP1L2Q8N4X5 818 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 CDYL2Q8N8U2 506 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 AMER3Q8N944 861 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 HUS1BQ8NHY5 278 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 THAP11Q96EK4 314 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 GBP5Q96PP8 586 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 HBEGFQ99075 208 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 CAPS2Q9BXY5 557 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 MS4A8Q9BY19 250 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZNF717Q9BY31 904 aaPredicted RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ACTR8Q9H981 624 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 MID1IP1Q9NPA3 183 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 DMRT3Q9NQL9 472 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 FAM53CQ9NYF3 392 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 DHCR7Q9UBM7 475 aaKnown RBP11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ZDHHC2Q9UIJ5 367 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 HAO1Q9UJM8 370 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ACSL6Q9UKU0 697 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 TIMM22Q9Y584 194 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 ANGPTL3Q9Y5C1 460 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 PCDHGA7Q9Y5G6 932 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 MGAQ8IWI9 3026 aa11.26□□□□□ -0.61
AP3B1-203ENST00000517940 MAGEB17A8MXT2 336 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 TERTO14746 1132 aaKnown RBP11.25□□□□□ -0.61
AP3B1-203ENST00000517940 NDUFS4O43181 175 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 CNOT3O75175 753 aaKnown RBP11.25□□□□□ -0.61
AP3B1-203ENST00000517940 SCRG1O75711 98 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 OR2B3O76000 313 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 STK17BO94768 372 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 KIAA0754O94854 1291 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 MLYCDO95822 493 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 OTCP00480 354 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 NTRK1P04629 796 aa11.25□□□□□ -0.61
AP3B1-203ENST00000517940 EIF2S1P05198 315 aaKnown RBP11.25□□□□□ -0.61
AP3B1-203ENST00000517940 CAPN1P07384 714 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms