RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 SLC26A7Q8TE54 656 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 HPSE2Q8WWQ2 592 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 CDK19Q9BWU1 502 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 FAM49AQ9H0Q0 323 aaPredicted RBP4.26□□□□□ -1.73
PCM1-205ENST00000517836 ACTL8Q9H568 366 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 LMAN1LQ9HAT1 526 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 SLC52A3Q9NQ40 469 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 C2orf42Q9NWW7 574 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 DDX43Q9NXZ2 648 aaKnown RBP4.26□□□□□ -1.73
PCM1-205ENST00000517836 C19orf25Q9UFG5 118 aaPredicted RBP4.26□□□□□ -1.73
PCM1-205ENST00000517836 CHKBQ9Y259 395 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 CPSF1Q10570 1443 aaKnown RBP4.26□□□□□ -1.73
PCM1-205ENST00000517836 NUP188Q5SRE5 1749 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 SHANK3Q9BYB0 1731 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 PEAK1Q9H792 1746 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 KIAA0232Q92628 1395 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 USP47Q96K76 1375 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 NINLQ9Y2I6 1382 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 NHSQ6T4R5 1651 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 CAMTA1Q9Y6Y1 1673 aa4.26□□□□□ -1.73
PCM1-205ENST00000517836 CLSPNQ9HAW4 1339 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 RGPD2P0DJD1 1756 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 PI4K2BG5E9Z4 385 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 ZNF197O14709 1029 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 SLC30A4O14863 429 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 NADKO95544 446 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 SP1P08047 785 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 PRSS56P0CW18 603 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 TIA1P31483 386 aaKnown RBP eCLIP4.25□□□□□ -1.73
PCM1-205ENST00000517836 TCF7P36402 384 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 MAGEA11P43364 429 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 CDX1P47902 265 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 GMPSP49915 693 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 CACNG1Q06432 222 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 HERC3Q15034 1050 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 RRS1Q15050 365 aaKnown RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 NONOQ15233 471 aaKnown RBP eCLIP4.25□□□□□ -1.73
PCM1-205ENST00000517836 RBBP7Q16576 425 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 GTDC1Q4AE62 458 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 ZRANB3Q5FWF4 1079 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 XKR6Q5GH73 641 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 LCN1P1Q5VSP4 162 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 ARHGEF16Q5VV41 709 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 LYSMD4Q5XG99 296 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 EDC4Q6P2E9 1401 aaKnown RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 MEX3BQ6ZN04 569 aaKnown RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 TMEM182Q6ZP80 229 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 SSH2Q76I76 1423 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 UNC5CLQ8IV45 518 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 APLFQ8IW19 511 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 KIRREL3Q8IZU9 778 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 DOT1LQ8TEK3 1739 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 SUSD6Q92537 303 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 DYRK2Q92630 601 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 P2RX5Q93086 422 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 TSACCQ96A04 125 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 AK8Q96MA6 479 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 PGLYRP2Q96PD5 576 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 F2RL3Q96RI0 385 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 COPS7BQ9H9Q2 264 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 PPANQ9NQ55 473 aaKnown RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 INTS9Q9NV88 658 aaKnown RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 CDH7Q9ULB5 785 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 TNNQ9UQP3 1299 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 ZFP37Q9Y6Q3 630 aaPredicted RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 A0A1W2PP64 1363 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 CPDO75976 1380 aa4.25□□□□□ -1.73
PCM1-205ENST00000517836 KTN1Q86UP2 1357 aaKnown RBP4.25□□□□□ -1.73
PCM1-205ENST00000517836 LRP5O75197 1615 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 IL16Q14005 1332 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 STK36Q9NRP7 1315 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 OOEPA6NGQ2 149 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 C2CD4DB7Z1M9 353 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 SLCO1B7G3V0H7 640 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 EPHB6O15197 1021 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 FCGR3BO75015 233 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 KRT33AO76009 404 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 NGFP01138 241 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 MUTP22033 750 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 CD27P26842 260 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 ATP5DP30049 168 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 PTENP60484 403 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 SULT2A1Q06520 285 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 RASGEF1BQ0VAM2 473 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 TEAD2Q15562 447 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 MEP1BQ16820 701 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 XKR3Q5GH77 459 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 NHSL2Q5HYW2 709 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 CTR9Q6PD62 1173 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 IL17RELQ6ZVW7 336 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 KLHL7Q8IXQ5 586 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 NIPA2Q8N8Q9 360 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 ATAD1Q8NBU5 361 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 GDAP1Q8TB36 358 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 DNASE2BQ8WZ79 361 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 ST6GALNAC6Q969X2 333 aa4.24□□□□□ -1.73
PCM1-205ENST00000517836 PYCR2Q96C36 320 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms