RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RUFY1Q96T51 708 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CD180Q99467 661 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TUBB2BQ9BVA1 445 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TBC1D10AQ9BXI6 508 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CHST8Q9H2A9 424 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 UPF2Q9HAU5 1272 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 OGFRQ9NZT2 677 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TBC1D29Q9UFV1 150 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PADI2Q9Y2J8 665 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PCDHA3Q9Y5H8 950 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 MXRA5Q9NR99 2828 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ANKRD12Q6UB98 2062 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CACNA1CQ13936 2221 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 DOCK10Q96BY6 2186 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CDHR4A6H8M9 788 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM90A8PA6NJQ4 464 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GPR89AB7ZAQ6 455 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 C19orf84I3L1E1 186 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 F2RL2O00254 374 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 TRAFD1O14545 582 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PHGDHO43175 533 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FRS3O43559 492 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CREB3O43889 395 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 KIF1CO43896 1103 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 VEGFDO43915 354 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 KCNJ13O60928 360 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GRAP2O75791 330 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 KLF7O75840 302 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 HEXIM1O94992 359 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 LETM1O95202 739 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 YEATS4O95619 227 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 EML2O95834 649 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CRYABP02511 175 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM90A13PP0C7W8 464 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM90A24PP0C7X0 464 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GPR89BP0CG08 455 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 NHLRC4P0CG21 123 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CYP2A6P11509 494 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FOLR1P15328 257 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CASP1P29466 404 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 RORAP35398 523 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 MAPK9P45984 424 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CAPZBP47756 277 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GABRB2P47870 512 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FMO5P49326 533 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SULT1E1P49888 294 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 RENBPP51606 427 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 TDGF1P3P51864 188 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GFERP55789 205 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 RAB1AP62820 205 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 UBE2IP63279 158 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CSNK1G2P78368 415 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 LRMPQ12912 555 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FOXD4Q12950 439 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GPS2Q13227 327 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ATP1A4Q13733 1029 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 HABP2Q14520 560 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 RFTN1Q14699 578 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 MANEALQ5VSG8 457 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 OTUD1Q5VV17 481 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 IRAK1BP1Q5VVH5 260 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 RAET1GQ6H3X3 334 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 DARS2Q6PI48 645 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SHC4Q6S5L8 630 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ABRAXAS1Q6UWZ7 409 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 GFRALQ6UXV0 394 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 WASH2PQ6VEQ5 465 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 MEX3BQ6ZN04 569 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM183BPQ6ZVS7 135 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 OVCH2Q7RTZ1 564 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 IRF2BP2Q7Z5L9 587 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CAMKMTQ7Z624 323 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 C11orf96Q7Z7L8 435 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM90A1Q86YD7 464 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM126BQ8IUX1 230 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 UMODL1-AS1Q8N2C9 162 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PELI3Q8N2H9 469 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC38A9Q8NBW4 561 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 TBC1D15Q8TC07 691 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ADAMTS18Q8TE60 1221 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PHF10Q8WUB8 498 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ZFPM2Q8WW38 1151 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SHC3Q92529 594 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SCAMP4Q969E2 229 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 RAB24Q969Q5 203 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC35C1Q96A29 364 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 AP2M1Q96CW1 435 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF501Q96CX3 271 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PAGE5Q96GU1 130 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 COX14Q96I36 57 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 VPS50Q96JG6 964 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF396Q96N95 335 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 CPXM1Q96SM3 734 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 EPS8L2Q9H6S3 715 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ZBTB20Q9HC78 741 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC40A1Q9NP59 571 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 POT1Q9NUX5 634 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PIH1D1Q9NWS0 290 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 STMN3Q9NZ72 180 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 LHX3Q9UBR4 397 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms