RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 OR13C4Q8NGS5 318 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 C16orf52Q8NHV5 167 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 M1APQ8TC57 530 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 ANKRD7Q92527 254 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 HAUS1Q96CS2 278 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 PBKQ96KB5 322 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 CABS1Q96KC9 395 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 FAM118BQ9BPY3 351 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 ZFYVE21Q9BQ24 234 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 FICDQ9BVA6 458 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 MAK16Q9BXY0 300 aaKnown RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 ATG10Q9H0Y0 220 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 TRIM45Q9H8W5 580 aaPredicted RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 MMP25Q9NPA2 562 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 INTS7Q9NVH2 962 aaKnown RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 FAM153AQ9UHL3 310 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 EFR3BQ9Y2G0 817 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 R3HDM2Q9Y2K5 976 aaKnown RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 LIPGQ9Y5X9 500 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 SAR1BQ9Y6B6 198 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 ABCA1O95477 2261 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.54□□□□□ -1.042e-7■■■■■ 42.4
NUP54-211ENST00000512151 A0A0A6YYC8 382 aaPredicted RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 SLC5A10A0PJK1 596 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 CLCA1A8K7I4 914 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 H0YGG7 62 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 I3L1I5 382 aaPredicted RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 CES2O00748 559 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 PEX1O43933 1283 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 SIX3O95343 332 aaPredicted RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 SLU7O95391 586 aaKnown RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 S1PR4O95977 384 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 HRGP04196 525 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 EPXP11678 715 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 TCP1P17987 556 aaKnown RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 NFKB1P19838 968 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 CD9P21926 228 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 GPR85P60893 370 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 ARF3P61204 181 aaPredicted RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 TFDP2Q14188 446 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 HKDC1Q2TB90 917 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 TEX44Q53QW1 395 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 SEL1L2Q5TEA6 688 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 FBXO42Q6P3S6 717 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 CAPN12Q6ZSI9 719 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 LRRC75A-AS1Q8N1F1 130 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 TEKT5Q96M29 485 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 OLFM3Q96PB7 478 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 SARGQ9BW04 601 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 C10orf88Q9H8K7 445 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 ZDHHC3Q9NYG2 299 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 TTC7AQ9ULT0 858 aaPredicted RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 RUVBL1Q9Y265 456 aaKnown RBP8.54□□□□□ -1.04
NUP54-211ENST00000512151 HEY1Q9Y5J3 304 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
NUP54-211ENST00000512151 PINLYPA6NC86 204 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 KRT87PA6NCN2 255 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ARHGEF33A8MVX0 844 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 TARM1B6A8C7 271 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 CFAP99D6REC4 459 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 NDC80O14777 642 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 LIN7AO14910 233 aaPredicted RBP8.53□□□□□ -1.04
NUP54-211ENST00000512151 SMPD2O60906 423 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 EPOP01588 193 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 FGGP02679 453 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 RUNX1T1Q06455 604 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 KCTD19Q17RG1 926 aaPredicted RBP8.53□□□□□ -1.04
NUP54-211ENST00000512151 ZNF449Q6P9G9 518 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 PRSS57Q6UWY2 283 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 SEM1Q6ZVN7 128 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 SERPINA9Q86WD7 417 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 PAQR7Q86WK9 346 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 RPS19BP1Q86WX3 136 aaKnown RBP8.53□□□□□ -1.04
NUP54-211ENST00000512151 VRK3Q8IV63 474 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 SLC5A8Q8N695 610 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ZFP62Q8NB50 900 aaPredicted RBP8.53□□□□□ -1.04
NUP54-211ENST00000512151 IPMKQ8NFU5 416 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 OR2L8Q8NGY9 312 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ACTL9Q8TC94 416 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ACTRT1Q8TDG2 376 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.53□□□□□ -1.04
NUP54-211ENST00000512151 METTL21AQ8WXB1 218 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 RNASE6Q93091 150 aaKnown RBP8.53□□□□□ -1.04
NUP54-211ENST00000512151 KIAA1191Q96A73 305 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ZUFSPQ96AP4 578 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ULK4Q96C45 1275 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 CAPZA3Q96KX2 299 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 MIPEPQ99797 713 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 CNPPD1Q9BV87 410 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 DEPPQ9NTK1 212 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 ADGRE2Q9UHX3 823 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 CDC14AQ9UNH5 594 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 KLK4Q9Y5K2 254 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 KIAA1549Q9HCM3 1950 aa8.53□□□□□ -1.04
NUP54-211ENST00000512151 TRBV5-4A0A0C4DH59 114 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 OR2A25A4D2G3 310 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 MBD3L4A6NDZ8 208 aaPredicted RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 MBD3L5A6NJ08 208 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms