RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 XPO7Q9UIA9 1087 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 FBXL3Q9UKT7 428 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PCDHGA11Q9Y5H2 935 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NCOR2Q9Y618 2525 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 LOC101059948A0A1B0GTJ6 334 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 FAM237BA0A1B0GVD1 139 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MAGEB17A8MXT2 336 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CHUKO15111 745 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PPM1DO15297 605 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 EIF3HO15372 352 aaKnown RBP eCLIP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 OR1F1O43749 312 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GREM1O60565 184 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GMNNO75496 209 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 RAF1P04049 648 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 INHBAP08476 426 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 UNGP13051 313 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GFAPP14136 432 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ANPEPP15144 967 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CRABP2P29373 138 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CA7P43166 264 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 DRG2P55039 364 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SESN2P58004 480 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 RPS23P62266 143 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PPIAP62937 165 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MRPL49Q13405 166 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TGIF1Q15583 401 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 OR1C1Q15619 314 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GPR19Q15760 415 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TMEM201Q5SNT2 666 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TSTD2Q5T7W7 516 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CAPN12Q6ZSI9 719 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PEG10Q86TG7 708 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 LAPTM4BQ86VI4 370 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CCDC25Q86WR0 208 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SPPL2CQ8IUH8 684 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CCDC63Q8NA47 563 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 FAM13CQ8NE31 585 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CPEB3Q8NE35 698 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TOR1AIP2Q8NFQ8 470 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 OR5K2Q8NHB8 316 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NANOS1Q8WY41 292 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TMEM234Q8WY98 164 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 RGMAQ96B86 450 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF669Q96BR6 464 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 COX14Q96I36 57 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 JSRP1Q96MG2 331 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SERPINB12Q96P63 405 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PSD2Q9BQI7 771 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 DPH7Q9BTV6 452 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TLR10Q9BXR5 811 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 HDHD5Q9BXW7 423 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CXCL16Q9H2A7 254 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 RAD21L1Q9H4I0 556 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF160Q9HCG1 818 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 BPIFA1Q9NP55 256 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 IL17CQ9P0M4 197 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 C6orf203Q9P0P8 240 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CLEC4EQ9ULY5 219 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SNX6Q9UNH7 406 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SLC22A7Q9Y694 548 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TRGV5A0A0B4J1U4 118 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TRBC2A0A5B9 178 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 OR6C65A6NJZ3 312 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 EEF1E1-BLOC1S5C9J1V9 151 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PGRMC1O00264 195 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 EEF1E1O43324 174 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MFSD11O43934 449 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MAFKO60675 156 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 DNAJB6O75190 326 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CD2BP2O95400 341 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 AGR2O95994 175 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 WNT11O96014 354 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ACTL6AO96019 429 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GOT2P00505 430 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CTSLP07711 333 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NAGAP17050 411 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ACRV1P26436 265 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GPC1P35052 558 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GZMKP49863 264 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ARF3P61204 181 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TAP2Q03519 686 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 DCTN2Q13561 401 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SQLEQ14534 574 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TAF5Q15542 800 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SPDYE7PQ495Y7 208 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 WIPI1Q5MNZ9 446 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ACER2Q5QJU3 275 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 C1orf185Q5T7R7 199 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 RIPPLY2Q5TAB7 128 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PLAG1Q6DJT9 500 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MED27Q6P2C8 311 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GJB7Q6PEY0 223 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MBOAT1Q6ZNC8 495 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 HDDC2Q7Z4H3 204 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 R3HCC1LQ7Z5L2 792 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 C17orf82Q86X59 251 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MISPQ8IVT2 679 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 TMEM151BQ8IW70 566 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 KLHL7Q8IXQ5 586 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SLC35G2Q8TBE7 412 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms