RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 OR13D1Q8NGV5 346 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC7A14Q8TBB6 771 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF384Q8TF68 577 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RNF141Q8WVD5 230 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TPD52L3Q96J77 140 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLITRK1Q96PX8 696 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 C12orf57Q99622 126 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 IRX2Q9BZI1 471 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SEMA6AQ9H2E6 1030 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 EBF3Q9H4W6 596 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MAGIXQ9H6Y5 334 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SUGCTQ9HAC7 445 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF286AQ9HBT8 521 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RPS10P5Q9NQ39 176 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 POT1Q9NUX5 634 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF586Q9NXT0 402 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 LRFN1Q9P244 771 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 NCDNQ9UBB6 729 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CACFD1Q9UGQ2 172 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CNOT6Q9ULM6 557 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SRPK3Q9UPE1 567 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 POLR1DQ9Y2S0 133 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FBXO7Q9Y3I1 522 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PCDHGA9Q9Y5G4 932 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 WIF1Q9Y5W5 379 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 USP42Q9H9J4 1324 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 A0A096LPK6 155 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 C2orf92A0A1B0GVN3 265 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 A0A1W2PPW3 197 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 A0A1W2PS29 197 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 BTBD17A6NE02 478 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 H3BNH8 94 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 POLRMTO00411 1230 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 UBFD1O14562 309 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 TNFRSF10BO14763 440 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 AURKAO14965 403 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GPR137BO60478 399 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DDNO94850 711 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 GGT1P19440 569 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CPN2P22792 545 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RPS12P25398 132 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 IL1R2P27930 398 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HLA-DMAP28067 261 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 KCNJ1P48048 391 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DGKGP49619 791 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ACOT2P49753 483 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MAP2K6P52564 334 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HCCSP53701 268 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC26A5P58743 744 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GPX6P59796 221 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GPR85P60893 370 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PRR5P85299 388 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FOXO1Q12778 655 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MTAPQ13126 283 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ARHGEF7Q14155 803 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CEBPEQ15744 281 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 NPTX1Q15818 432 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MOGAT2Q3SYC2 334 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CRTC2Q53ET0 693 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 GPAT3Q53EU6 434 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PSMG4Q5JS54 123 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DCST1Q5T197 706 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 NT5DC1Q5TFE4 455 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DUPD1Q68J44 220 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 OR4A47Q6IF82 309 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC35D2Q76EJ3 337 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 BPHLQ86WA6 291 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 MCOLN2Q8IZK6 566 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SYNE4Q8N205 404 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TRAM1L1Q8N609 369 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HORMAD2Q8N7B1 307 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF366Q8N895 744 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 OR4A4PQ8NGN8 299 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ADAMTS16Q8TE57 1224 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 STON2Q8WXE9 905 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PIWIL1Q96J94 861 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 TGM7Q96PF1 710 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HAPLN3Q96S86 360 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SYT3Q9BQG1 590 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ATG101Q9BSB4 218 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FUCA2Q9BTY2 467 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DPCDQ9BVM2 203 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 NT5C1AQ9BXI3 368 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 IDI2Q9BXS1 227 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SAP130Q9H0E3 1048 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ATP13A2Q9NQ11 1180 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC2A9Q9NRM0 540 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.48□□□□□ -1.85
USP53-205ENST00000509769 RLIMQ9NVW2 624 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 NKIRAS2Q9NYR9 191 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 KCNIP1Q9NZI2 227 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ARMCX1Q9P291 453 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HRH3Q9Y5N1 445 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 A0A087WZY1 265 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TEX33O43247 280 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 KDELR3O43731 214 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MAFKO60675 156 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC43A1O75387 559 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms