RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SPNS1Q9H2V7 528 aa14.98□□□□□ -0.01
RAB40C-202ENST00000509637 KCNK13Q9HB14 408 aa14.98□□□□□ -0.01
RAB40C-202ENST00000509637 FAM114A2Q9NRY5 505 aa14.98□□□□□ -0.01
RAB40C-202ENST00000509637 INTS10Q9NVR2 710 aaKnown RBP14.98□□□□□ -0.01
RAB40C-202ENST00000509637 KLHL42Q9P2K6 505 aa14.98□□□□□ -0.01
RAB40C-202ENST00000509637 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 FAM237BA0A1B0GVD1 139 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 E5RI56 91 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 NPIPA5E9PKD4 350 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 FAM227AF5H4B4 570 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 CDC123O75794 336 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 CCNDBP1O95273 360 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 HSD17B2P37059 387 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 MAGEA3P43357 314 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 AVPR1BP47901 424 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 TBPL1P62380 186 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 CDK16Q00536 496 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 DHX34Q14147 1143 aaKnown RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 TESK1Q15569 626 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 OR1C1Q15619 314 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 PHKG1Q16816 387 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 PAPD4Q6PIY7 484 aaKnown RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 C3P1Q6ZMU1 363 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 UBE2R2Q712K3 238 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 GDF7Q7Z4P5 450 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 GALNTL5Q7Z4T8 443 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 SPPL2CQ8IUH8 684 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 PLPP5Q8NEB5 264 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 THAP3Q8WTV1 239 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 EEF1AKMT1Q8WVE0 214 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 KCNJ9Q92806 393 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 PEX11GQ96HA9 241 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 SIGLEC10Q96LC7 697 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 ZNF354BQ96LW1 612 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 AICDAQ9GZX7 198 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 MMP25Q9NPA2 562 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 SUCOQ9UBS9 1254 aaKnown RBP14.97□□□□□ -0.01
RAB40C-202ENST00000509637 NPIPA1Q9UND3 350 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 MEMO1Q9Y316 297 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 ASB1Q9Y576 335 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 PCDHGB6Q9Y5F9 930 aa14.97□□□□□ -0.01
RAB40C-202ENST00000509637 CELSR1Q9NYQ6 3014 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 C2CD3Q4AC94 2353 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 GOLGA8MH3BSY2 632 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 TXNDC9O14530 226 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 NPPBP16860 134 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 PTGER4P35408 488 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 OLR1P78380 273 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 MEF2AQ02078 507 aaPredicted RBP14.96□□□□□ -0.01
RAB40C-202ENST00000509637 GPS1Q13098 491 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 USP10Q14694 798 aaKnown RBP14.96□□□□□ -0.01
RAB40C-202ENST00000509637 NAA30Q147X3 362 aaPredicted RBP14.96□□□□□ -0.01
RAB40C-202ENST00000509637 NDUFA9Q16795 377 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 THEMIS2Q5TEJ8 643 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 MFSD4BQ5TF39 518 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 XKRXQ6PP77 449 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 C4orf22Q6V702 233 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 RPTNQ6XPR3 784 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 GSTA5Q7RTV2 222 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 PCGF5Q86SE9 256 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 DOLPP1Q86YN1 238 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 AFAP1L2Q8N4X5 818 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 ZNF740Q8NDX6 193 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 M1APQ8TC57 530 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 METTL21AQ8WXB1 218 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 OR4K3Q96R72 315 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 NDNQ99608 321 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 AARSD1Q9BTE6 412 aaKnown RBP14.96□□□□□ -0.01
RAB40C-202ENST00000509637 SGPP1Q9BX95 441 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 CDCP1Q9H5V8 836 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 PLAC1Q9HBJ0 212 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 ITGB1BP2Q9UKP3 347 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 IKZF3Q9UKT9 509 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 NAALAD2Q9Y3Q0 740 aa14.96□□□□□ -0.01
RAB40C-202ENST00000509637 CTAGE9A4FU28 777 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 GABRR3A8MPY1 467 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 C4orf51C9J302 202 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 ASNA1O43681 348 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 ZBTB14O43829 449 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 CEP104O60308 925 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 UQCRHP07919 91 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 CDH1P12830 882 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 COX6B1P14854 86 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 SLC26A5P58743 744 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 RPS15AP62244 130 aaKnown RBP14.95□□□□□ -0.02
RAB40C-202ENST00000509637 BTG2P78543 158 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 NAE1Q13564 534 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 PTK6Q13882 451 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 RBM20Q5T481 1227 aaKnown RBP14.95□□□□□ -0.02
RAB40C-202ENST00000509637 AGTRAPQ6RW13 159 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 ELP5Q8TE02 316 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 MTFMTQ96DP5 389 aaKnown RBP14.95□□□□□ -0.02
RAB40C-202ENST00000509637 SERPINB12Q96P63 405 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 DMRTA2Q96SC8 542 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 CHST11Q9NPF2 352 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 SLC17A6Q9P2U8 582 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 FBXO5Q9UKT4 447 aa14.95□□□□□ -0.02
RAB40C-202ENST00000509637 AP3B1O00203 1094 aa14.94□□□□□ -0.02
RAB40C-202ENST00000509637 TTI1O43156 1089 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms