RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 NEU2Q9Y3R4 380 aa12.59□□□□□ -0.39
DDX41-210ENST00000509576 ASB1Q9Y576 335 aa12.59□□□□□ -0.39
DDX41-210ENST00000509576 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
DDX41-210ENST00000509576 KCNE1BA0A087WTH5 132 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 H3BMM5 538 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 PRPF4O43172 522 aaKnown RBP eCLIP12.58□□□□□ -0.46e-6■■■■□ 20.1
DDX41-210ENST00000509576 KIF5CO60282 957 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 CDC123O75794 336 aaPredicted RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 KRT38O76015 456 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 HAUS5O94927 633 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 SYF2O95926 243 aaKnown RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 FGGP02679 453 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 MPC1LP0DKB6 136 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 MAGEA3P43357 314 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 OLR1P78380 273 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 ABATP80404 500 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 NAA25Q14CX7 972 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 OR1C1Q15619 314 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 PHKG1Q16816 387 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 SFT2D3Q587I9 215 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 RNF187Q5TA31 235 aaPredicted RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 SDCCAG8Q86SQ7 713 aaPredicted RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 SPPL2CQ8IUH8 684 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 SPC24Q8NBT2 197 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 THAP3Q8WTV1 239 aaPredicted RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 RERGQ96A58 199 aaPredicted RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 ZNF669Q96BR6 464 aaPredicted RBP12.58□□□□□ -0.4
DDX41-210ENST00000509576 DMRTA2Q96SC8 542 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 PLAC1Q9HBJ0 212 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 MMP25Q9NPA2 562 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 TMEM184CQ9NVA4 438 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 IKZF3Q9UKT9 509 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 PDE10AQ9Y233 779 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 MEMO1Q9Y316 297 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 PCDHGB6Q9Y5F9 930 aa12.58□□□□□ -0.4
DDX41-210ENST00000509576 HRNRQ86YZ3 2850 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 NPIPA5E9PKD4 350 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 FAM227AF5H4B4 570 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 COX6B1P14854 86 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 GABRB3P28472 473 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 CXCR5P32302 372 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 SLC26A5P58743 744 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 MEF2AQ02078 507 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 USP10Q14694 798 aaKnown RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 UBE2R2Q712K3 238 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 GALNTL5Q7Z4T8 443 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 PCGF5Q86SE9 256 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 DOLPP1Q86YN1 238 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 MARVELD2Q8N4S9 558 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 AFAP1L2Q8N4X5 818 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 CPSF7Q8N684 471 aaKnown RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 ZNF740Q8NDX6 193 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 KCNJ9Q92806 393 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 PEX11GQ96HA9 241 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 OR4K3Q96R72 315 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 NDNQ99608 321 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 TREX2Q9BQ50 279 aaPredicted RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 ATG10Q9H0Y0 220 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 KCNK13Q9HB14 408 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 FAM114A2Q9NRY5 505 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 INTS10Q9NVR2 710 aaKnown RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 SLC17A6Q9P2U8 582 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 SUCOQ9UBS9 1254 aaKnown RBP12.57□□□□□ -0.4
DDX41-210ENST00000509576 NPIPA1Q9UND3 350 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 NAALAD2Q9Y3Q0 740 aa12.57□□□□□ -0.4
DDX41-210ENST00000509576 VPS13CQ709C8 3753 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 FAM237BA0A1B0GVD1 139 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 GABRR3A8MPY1 467 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 E5RI56 91 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 GOLGA8MH3BSY2 632 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 CCNDBP1O95273 360 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 TSPAN12O95859 305 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 CDH1P12830 882 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 ICAM2P13598 275 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 PTGER1P34995 402 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 HSD17B2P37059 387 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 AVPR1BP47901 424 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 CDK16Q00536 496 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 PTK6Q13882 451 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 DHX34Q14147 1143 aaKnown RBP12.56□□□□□ -0.4
DDX41-210ENST00000509576 ABRAXAS2Q15018 415 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 RBM20Q5T481 1227 aaKnown RBP12.56□□□□□ -0.4
DDX41-210ENST00000509576 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 XKRXQ6PP77 449 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 PLPP5Q8NEB5 264 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 M1APQ8TC57 530 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 ELP5Q8TE02 316 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 EEF1AKMT1Q8WVE0 214 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
DDX41-210ENST00000509576 SIGLEC10Q96LC7 697 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 ZNF354BQ96LW1 612 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 SERPINB12Q96P63 405 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 AARSD1Q9BTE6 412 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms