RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZWINTO95229 277 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 TPM1P09493 284 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 RPS3P23396 243 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD9-211ENST00000508546 HSD17B2P37059 387 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 BCL6P41182 706 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 CETN2P41208 172 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MAGEA1P43355 309 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 XCR1P46094 333 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 CYB561P49447 251 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 ST13P50502 369 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 SNRPNP63162 240 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 ADAM8P78325 824 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 ABATP80404 500 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MYBPHQ13203 477 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 USP10Q14694 798 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 SFT2D3Q587I9 215 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 LDB1Q86U70 411 aaPredicted RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 RPS19BP1Q86WX3 136 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 ZNF227Q86WZ6 799 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 CLYBLQ8N0X4 340 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MPP5Q8N3R9 675 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 PLPP5Q8NEB5 264 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 C16orf52Q8NHV5 167 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MCOLN3Q8TDD5 553 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 ELP5Q8TE02 316 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 EBNA1BP2Q99848 306 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 UCK2Q9BZX2 261 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 CDCP1Q9H5V8 836 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 CATSPERZQ9NTU4 200 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MARCH4Q9P2E8 410 aaPredicted RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 TAC3Q9UHF0 121 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 ST6GALNAC2Q9UJ37 374 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 R3HDM2Q9Y2K5 976 aaKnown RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 KLF13Q9Y2Y9 288 aaPredicted RBP8.82□□□□□ -1
NEDD9-211ENST00000508546 TCAF1Q9Y4C2 921 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 OR2W5A6NFC9 320 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 USP27XA6NNY8 438 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 ARHGEF33A8MVX0 844 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 MAGEB17A8MXT2 336 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 NDC80O14777 642 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 HAT1O14929 419 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 TFECO14948 347 aaPredicted RBP8.81□□□□□ -1
NEDD9-211ENST00000508546 CD3EAPO15446 510 aaKnown RBP8.81□□□□□ -1
NEDD9-211ENST00000508546 KIF5CO60282 957 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 PRMT3O60678 531 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 PSIP1O75475 530 aaKnown RBP8.81□□□□□ -1
NEDD9-211ENST00000508546 CTAG2O75638 210 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 HEXAP06865 529 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 TFEBP19484 476 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 IL10P22301 178 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 TRHRP34981 398 aaPredicted RBP8.81□□□□□ -1
NEDD9-211ENST00000508546 MEOX1P50221 254 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 PNLIPRP1P54315 467 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 GDF10P55107 478 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 RWDD2BP57060 319 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 SLC26A5P58743 744 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 MPP1Q00013 466 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 RHAGQ02094 409 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 ACTN3Q08043 901 aaPredicted RBP8.81□□□□□ -1
NEDD9-211ENST00000508546 ABRAXAS2Q15018 415 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 NSDHLQ15738 373 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 CMPK2Q5EBM0 449 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 CLEC9AQ6UXN8 241 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 ACAD11Q709F0 780 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 PRSS41Q7RTY9 318 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 SHISA5Q8N114 240 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 ARMC10Q8N2F6 343 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 MYRIPQ8NFW9 859 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 TMEM125Q96AQ2 219 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 SEC16BQ96JE7 1060 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 ALPK1Q96QP1 1244 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 OR1F2PQ96R84 312 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 FAM114A2Q9NRY5 505 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 DNAJB12Q9NXW2 375 aaKnown RBP8.81□□□□□ -1
NEDD9-211ENST00000508546 HCN3Q9P1Z3 774 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 ADAM21Q9UKJ8 722 aa8.81□□□□□ -1
NEDD9-211ENST00000508546 KCNE1BA0A087WTH5 132 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 FAM237BA0A1B0GVD1 139 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 GOLGA6L9A6NEM1 432 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 E7ENX8 843 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 KLRC4-KLRK1H3BQV0 150 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 NDUFS3O75489 264 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 SLC16A8O95907 504 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 CATP04040 527 aaKnown RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 IL1RNP18510 177 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 HRH2P25021 359 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 PCSK6P29122 969 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 TPP2P29144 1249 aaPredicted RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 HLCSP50747 726 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 EIF3BP55884 814 aaKnown RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 MLF1P58340 268 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 RPS15AP62244 130 aaKnown RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 TAP2Q03519 686 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 TSTA3Q13630 321 aaPredicted RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 EMC4Q5J8M3 183 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 TMEM214Q6NUQ4 689 aaKnown RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 AADACL2Q6P093 401 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 ARHGAP11AQ6P4F7 1023 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms