RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 HIBCHQ6NVY1 386 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 SUSD1Q6UWL2 747 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 IGFL2Q6UWQ7 119 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 PIWIL4Q7Z3Z4 852 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 IGDCC3Q8IVU1 814 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 TMEM151BQ8IW70 566 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 CPNE9Q8IYJ1 553 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 Q8NA96 180 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 CPT1CQ8TCG5 803 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 MCOLN3Q8TDD5 553 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 C10orf90Q96M02 699 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 CCDC138Q96M89 665 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 BARD1Q99728 777 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 FAM129AQ9BZQ8 928 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 TGIF2Q9GZN2 237 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 PARVBQ9HBI1 364 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 IARS2Q9NSE4 1012 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 TMEM184CQ9NVA4 438 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 RNF14Q9UBS8 474 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 CTSFQ9UBX1 484 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 ZNF282Q9UDV7 671 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 ASIC3Q9UHC3 531 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 TAC3Q9UHF0 121 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 TRMT6Q9UJA5 497 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 FBXL4Q9UKA2 621 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 HS3ST3B1Q9Y662 390 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 SAR1BQ9Y6B6 198 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 TEX264Q9Y6I9 313 aa7.57□□□□□ -1.2
UBE2D3-222ENST00000508238 USP27XA6NNY8 438 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CCDC188H7C350 402 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PRPF4O43172 522 aaKnown RBP eCLIP7.56□□□□□ -1.23e-7■■□□□ 13.1
UBE2D3-222ENST00000508238 TSPAN12O95859 305 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 B3GALT4O96024 378 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 EIF2S1P05198 315 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 F7P08709 466 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 ZGLP1P0C6A0 271 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CCND1P24385 295 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 SLC26A3P40879 764 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CDKN2DP55273 166 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 GNG11P61952 73 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 DR1Q01658 176 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 OCA2Q04671 838 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 KLC1Q07866 573 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 SRSF1Q07955 248 aaKnown RBP eCLIP7.56□□□□□ -1.22e-8■□□□□ 10.6
UBE2D3-222ENST00000508238 SETDB1Q15047 1291 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 INPP5JQ15735 1006 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 BBS9Q3SYG4 887 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PLEKHN1Q494U1 663 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CRB2Q5IJ48 1285 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PRAMEF13Q5VWM6 474 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PAQR3Q6TCH7 311 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 Q6ZS92 163 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 UBE2R2Q712K3 238 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 FAM26EQ8N5C1 309 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 DTWD1Q8N5C7 304 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CSNK1A1LQ8N752 337 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 OR11G2Q8NGC1 345 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 STT3BQ8TCJ2 826 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 EEF1AKMT1Q8WVE0 214 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 TM9SF4Q92544 642 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 RERGQ96A58 199 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CERS2Q96G23 380 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PDLIM5Q96HC4 596 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CABS1Q96KC9 395 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 NAPGQ99747 312 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 SGPP1Q9BX95 441 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 SYNPO2LQ9H987 977 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 STOX2Q9P2F5 926 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CDC23Q9UJX2 597 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 CORO1CQ9ULV4 474 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PDE10AQ9Y233 779 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 RUVBL1Q9Y265 456 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 B3GNT3Q9Y2A9 372 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 VWA7Q9Y334 891 aa7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 SPENQ96T58 3664 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-222ENST00000508238 PKDREJQ9NTG1 2253 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 GTF3C1Q12789 2109 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 E7ESA3 106 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 H7BY64 318 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 FOXS1O43638 330 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 VPS4BO75351 444 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 DEAF1O75398 565 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 BANF1O75531 89 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 SEC31AO94979 1220 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 SYF2O95926 243 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 CYC1P08574 325 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 NPPBP16860 134 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 ELK3P41970 407 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 PAFAH1B1P43034 410 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 AP1S2P56377 157 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 IL2P60568 153 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 RPS15AP62244 130 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 RAC1P63000 192 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 ILF2Q12905 390 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 RBBP7Q16576 425 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 HKDC1Q2TB90 917 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 TUBB8Q3ZCM7 444 aa7.55□□□□□ -1.2
UBE2D3-222ENST00000508238 RBM20Q5T481 1227 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms