RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 NAXDQ8IW45 347 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 TRPV3Q8NET8 790 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 APIPQ96GX9 242 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 FCRL4Q96PJ5 515 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 LRRC37BQ96QE4 947 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 ZFYVE21Q9BQ24 234 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 NUDT22Q9BRQ3 303 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 TMEM9Q9P0T7 183 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
RNF4-209ENST00000507784 PCDHGA4Q9Y5G9 962 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 AP1M2Q9Y6Q5 423 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 GOLGA4Q13439 2230 aaKnown RBP16.71■□□□□ 0.27
RNF4-209ENST00000507784 MUC3AQ02505 3323 aa16.71■□□□□ 0.27
RNF4-209ENST00000507784 IGHV5-51A0A0C4DH38 117 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 CTSVO60911 334 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 CLEC3AO75596 197 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 MYO1DO94832 1006 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 ETHE1O95571 254 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 EIF2S1P05198 315 aaKnown RBP16.7■□□□□ 0.26
RNF4-209ENST00000507784 SERPINA6P08185 405 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 PRR35P0CG20 571 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 CSF2RBP32927 897 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 MLLT3P42568 568 aaPredicted RBP16.7■□□□□ 0.26
RNF4-209ENST00000507784 RAP1GDS1P52306 607 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 ERVK-8P63133 956 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 MAD2L1Q13257 205 aaPredicted RBP16.7■□□□□ 0.26
RNF4-209ENST00000507784 TOR1AIP1Q5JTV8 583 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 TMEM71Q6P5X7 295 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 WDR74Q6RFH5 385 aaPredicted RBP16.7■□□□□ 0.26
RNF4-209ENST00000507784 CHSY3Q70JA7 882 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 ASPGQ86U10 573 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 ZFAND4Q86XD8 727 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 SLC13A3Q8WWT9 602 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 RERGQ96A58 199 aaPredicted RBP16.7■□□□□ 0.26
RNF4-209ENST00000507784 THAP11Q96EK4 314 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 TCTN2Q96GX1 697 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 F2RL3Q96RI0 385 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 MACROD1Q9BQ69 325 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 SARGQ9BW04 601 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 MS4A8Q9BY19 250 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 NMUR2Q9GZQ4 415 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 MYLK2Q9H1R3 596 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
RNF4-209ENST00000507784 KLK4Q9Y5K2 254 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 RP1P56715 2156 aa16.7■□□□□ 0.26
RNF4-209ENST00000507784 A0A1W2PQM1 296 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 CCT8L1PA6NM43 557 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 H0YGG7 62 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 EBAG9O00559 213 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 NDUFS4O43181 175 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 CPNE6O95741 557 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 C9P02748 559 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 ALDOCP09972 364 aaKnown RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 PRPH2P23942 346 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 GSTM2P28161 218 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 NME5P56597 212 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 ARF3P61204 181 aaPredicted RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 STX1BP61266 288 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 EMX2Q04743 252 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 ACSM2AQ08AH3 577 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 UBAP2LQ14157 1087 aaKnown RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 DEFB110Q30KQ9 67 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 RFTN2Q52LD8 501 aaPredicted RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 CCDC157Q569K6 752 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 ZC3H12BQ5HYM0 836 aaKnown RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 DEPDC1Q5TB30 811 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 IL23RQ5VWK5 629 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 ACSM2BQ68CK6 577 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 TRPM8Q7Z2W7 1104 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 CREB3L4Q8TEY5 395 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 N4BP2L2Q92802 583 aaPredicted RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 GFM1Q96RP9 751 aaKnown RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 MRPL1Q9BYD6 325 aaKnown RBP16.69■□□□□ 0.26
RNF4-209ENST00000507784 FAM60AQ9NP50 221 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 SAR1AQ9NR31 198 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 AHSPQ9NZD4 102 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 ARMCX1Q9P291 453 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 PILRAQ9UKJ1 303 aa16.69■□□□□ 0.26
RNF4-209ENST00000507784 UNC13CQ8NB66 2214 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 LOC105369274A0A096LPK9 316 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 LOC102723532A0A0G2JNH3 316 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 GDF9O60383 454 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 ZBTB11O95625 1053 aaPredicted RBP16.68■□□□□ 0.26
RNF4-209ENST00000507784 MAPK1P28482 360 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 VSX2P58304 361 aaPredicted RBP16.68■□□□□ 0.26
RNF4-209ENST00000507784 RELAQ04206 551 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 RGS1Q08116 209 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 SQLEQ14534 574 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 SMU1Q2TAY7 513 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 FRMPD2BQ6IN97 320 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 OGFOD2Q6N063 350 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 FOXR1Q6PIV2 292 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 RNF44Q7L0R7 432 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 MCATQ8IVS2 390 aaKnown RBP16.68■□□□□ 0.26
RNF4-209ENST00000507784 OR4N4Q8N0Y3 316 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 FITM2Q8N6M3 262 aa16.68■□□□□ 0.26
RNF4-209ENST00000507784 C1orf52Q8N6N3 182 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms