RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PAQR6Q6TCH4 344 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 METTL7BQ6UX53 244 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 FAM47EQ6ZV65 393 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 AMIGO1Q86WK6 493 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 CCDC60Q8IWA6 550 aaPredicted RBP3.22□□□□□ -1.89
CHD1-203ENST00000505657 ATXN7L3BQ96GX2 97 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 SNX7Q9UNH6 387 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 WIPI2Q9Y4P8 454 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 NEDD4P46934 1319 aa3.21□□□□□ -1.89
CHD1-203ENST00000505657 IGHV3OR16-10A0A075B7F0 116 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 A0A087WZ39 114 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 IGKV3D-20A0A0C4DH25 116 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 PPIP5K2O43314 1243 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 CYTIPO60759 359 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 FCGR3BO75015 233 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 CEACAM4O75871 244 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 LUC7L3O95232 432 aaKnown RBP3.21□□□□□ -1.9
CHD1-203ENST00000505657 QDPRP09417 244 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 CLDN17P56750 224 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 DUSP5Q16690 384 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 FAM91A1Q658Y4 838 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 TXNRD3NBQ6F5E7 133 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 GDPGP1Q6ZNW5 385 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 GPRIN3Q6ZVF9 776 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 MIPOL1Q8TD10 442 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 EXOC4Q96A65 974 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 NXPE2Q96DL1 559 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 RNF121Q9H920 327 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 B3GAT2Q9NPZ5 323 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 IL36AQ9UHA7 158 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 KLK13Q9UKR3 277 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 POMT2Q9UKY4 750 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 KLK4Q9Y5K2 254 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 SELENOKQ9Y6D0 94 aa3.21□□□□□ -1.9
CHD1-203ENST00000505657 IL16Q14005 1332 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 E5RGE8 158 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 K7EQD1 137 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 SURF4O15260 269 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 HSPA4LO95757 839 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 DLATP10515 647 aaKnown RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 AADACP22760 399 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 SSTR1P30872 391 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 TIA1P31483 386 aaKnown RBP eCLIP3.2□□□□□ -1.9
CHD1-203ENST00000505657 CDX1P47902 265 aaPredicted RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 CAPZA1P52907 286 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 NAGLUP54802 743 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 TMEM50BP56557 158 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 DSCR10P59022 87 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 BTG1P62324 171 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 IRX6P78412 446 aaPredicted RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 SULT2A1Q06520 285 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 MTHFSDQ2M296 383 aaKnown RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 ALDH1L2Q3SY69 923 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 SHEQ5VZ18 495 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 CAVIN1Q6NZI2 390 aaKnown RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 NOTUMQ6P988 496 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 PRSS55Q6UWB4 352 aaPredicted RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 SPATA19Q7Z5L4 167 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 ZER1Q7Z7L7 766 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 CROCCP3Q8IVE0 287 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 ZC3H3Q8IXZ2 948 aaKnown RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 THNSL1Q8IYQ7 743 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 Q8N377 158 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 OR5T2Q8NGG2 359 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 C9orf43Q8TAL5 461 aaPredicted RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 FAM222BQ8WU58 562 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 AGAP4Q96P64 663 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 IARS2Q9NSE4 1012 aaKnown RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 NDE1Q9NXR1 346 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 THAP10Q9P2Z0 257 aaPredicted RBP3.2□□□□□ -1.9
CHD1-203ENST00000505657 FBXL4Q9UKA2 621 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 NSG2Q9Y328 171 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 COLEC10Q9Y6Z7 277 aa3.2□□□□□ -1.9
CHD1-203ENST00000505657 ARHGEF37A1IGU5 675 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 C5orf52A6NGY3 159 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 SHISA7A6NL88 538 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 A8MVM7 634 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 SLC1A7O00341 560 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 MAGEB2O15479 319 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 FLRT2O43155 660 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 MLNRO43193 412 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 NXPH4O95158 308 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 PGLSO95336 258 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 YES1P07947 543 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 ZFYP08048 801 aaPredicted RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 ANKRD34CP0C6C1 535 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 EEF2P13639 858 aaKnown RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 MYOGP15173 224 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 IFNAR1P17181 557 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 GATA2P23769 480 aaPredicted RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 GP5P40197 560 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 DHODHQ02127 395 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 IL10RBQ08334 325 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 ELAVL2Q12926 359 aaKnown RBP3.19□□□□□ -1.9
CHD1-203ENST00000505657 TCTEX1D4Q5JR98 221 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 ATP1A1-AS1Q5TC04 95 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 FAM46CQ5VWP2 391 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 FUT10Q6P4F1 479 aa3.19□□□□□ -1.9
CHD1-203ENST00000505657 DCLRE1AQ6PJP8 1040 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms