RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ADAMTS17Q8TE56 1095 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 NOL11Q9H8H0 719 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 GMEB1Q9Y692 573 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 H0YGG7 62 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 GUCA1CO95843 209 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 SAT1P21673 171 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 CXCR2P25025 360 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ALDH4A1P30038 563 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 FRKP42685 505 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZFP36L2P47974 494 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 FOXA1P55317 472 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ARF3P61204 181 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 METTL4Q8N3J2 472 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLC38A9Q8NBW4 561 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 CFAP61Q8NHU2 1237 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 UBE2E3Q969T4 207 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 GAL3ST3Q96A11 431 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 PYCR2Q96C36 320 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 UNKQ9C0B0 810 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 RNF11Q9Y3C5 154 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 RAP2CQ9Y3L5 183 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 IGKV3D-11A0A0A0MRZ8 115 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 MANBAO00462 879 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 RSL1D1O76021 490 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 NSA2O95478 260 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ETHE1O95571 254 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 PVRP15151 417 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 PCSK2P16519 638 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 SH2D4BQ5SQS7 431 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 AP1ARQ63HQ0 302 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 OGFOD2Q6N063 350 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TEX9Q8N6V9 391 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF740Q8NDX6 193 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TRPV3Q8NET8 790 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 AIF1LQ9BQI0 150 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 STRADBQ9C0K7 418 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 LYRM4Q9HD34 91 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 UTP6Q9NYH9 597 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 SATB2Q9UPW6 733 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 RUVBL1Q9Y265 456 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 DNAJC15Q9Y5T4 150 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 BLACEA4D250 179 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 TMEM8BA6NDV4 472 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PLD2O14939 933 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 S100BP04271 92 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 NR1D1P20393 614 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ITGA1P56199 1179 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 TRA2BP62995 288 aaKnown RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PLCL1Q15111 1095 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CAMKMTQ7Z624 323 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 SYTL1Q8IYJ3 562 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF75CPQ92670 426 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 NACC2Q96BF6 587 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 THAP1Q9NVV9 213 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CPSF2Q9P2I0 782 aaKnown RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZDHHC2Q9UIJ5 367 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PCDHGA11Q9Y5H2 935 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 LSM1O15116 133 aaKnown RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CNOT3O75175 753 aaKnown RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ALBP02768 609 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CHN1P15882 459 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF28P17035 718 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 AMD1P17707 334 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 SOX18P35713 384 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 TCEA2Q15560 299 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ADNP2Q6IQ32 1131 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ABHD17CQ6PCB6 329 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 Q6ZSR9 355 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 GPRIN3Q6ZVF9 776 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 OR2T11Q8NH01 316 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 TRPC4APQ8TEL6 797 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 HOXB13Q92826 284 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 SIKE1Q9BRV8 207 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 SHCBP1LQ9BZQ2 653 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ACBD3Q9H3P7 528 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 KCNK13Q9HB14 408 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 RYDENQ9NUL5 291 aaKnown RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 FOXJ2Q9P0K8 574 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 DYRK1BQ9Y463 629 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 H7BY64 318 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PCDH17O14917 1159 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ANKRD28O15084 1053 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF749O43361 778 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 GALR3O60755 368 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CCL4P13236 92 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 HGFP14210 728 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 GALNSP34059 522 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CCR10P46092 362 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CHIT1Q13231 466 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLBPQ14493 270 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ARL13AQ5H913 290 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PAGE2BQ5JRK9 111 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PWWP2BQ6NUJ5 590 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 MED27Q6P2C8 311 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PRMT9Q6P2P2 845 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 TMIGD1Q6UXZ0 262 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CEACAM20Q6UY09 585 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ASPGQ86U10 573 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CUZD1Q86UP6 607 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms