RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DUPD1Q68J44 220 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 TRMT10BQ6PF06 316 aaKnown RBP20.88■□□□□ 0.93
LSM6-203ENST00000503982 FAM180AQ6UWF9 173 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 VN1R4Q7Z5H5 301 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 SLC26A11Q86WA9 606 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 BBOF1Q8ND07 529 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 GRHL3Q8TE85 626 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 ATL1Q8WXF7 558 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 LRRC39Q96DD0 335 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.88■□□□□ 0.93
LSM6-203ENST00000503982 PLA2G3Q9NZ20 509 aa20.88■□□□□ 0.93
LSM6-203ENST00000503982 C19orf25Q9UFG5 118 aaPredicted RBP20.88■□□□□ 0.93
LSM6-203ENST00000503982 USP9YO00507 2555 aaPredicted RBP20.88■□□□□ 0.93
LSM6-203ENST00000503982 NAV2Q8IVL1 2488 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 SPTBN1Q01082 2364 aaKnown RBP20.87■□□□□ 0.93
LSM6-203ENST00000503982 EFCAB8A8MWE9 144 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 BMP10O95393 424 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 DDAH2O95865 285 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 F10P00742 488 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 CELA2AP08217 269 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 XCR1P46094 333 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 CCR8P51685 355 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 AP1S2P56377 157 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 PDIA2Q13087 525 aaKnown RBP20.87■□□□□ 0.93
LSM6-203ENST00000503982 B3GNTL1Q67FW5 361 aaPredicted RBP20.87■□□□□ 0.93
LSM6-203ENST00000503982 HIST2H2BCQ6DN03 193 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 GALNT7Q86SF2 657 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 ARHGEF39Q8N4T4 335 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 CEP112Q8N8E3 955 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 OR51Q1Q8NH59 317 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 OLFM1Q99784 485 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 RAB17Q9H0T7 212 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 L2HGDHQ9H9P8 463 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 WHRNQ9P202 907 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 DYRK1BQ9Y463 629 aa20.87■□□□□ 0.93
LSM6-203ENST00000503982 MAST4O15021 2626 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 KCNE1BA0A087WTH5 132 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 OR1F1O43749 312 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 LCMT2O60294 686 aaKnown RBP20.86■□□□□ 0.93
LSM6-203ENST00000503982 RDH16O75452 317 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 SEC24DO94855 1032 aaPredicted RBP20.86■□□□□ 0.93
LSM6-203ENST00000503982 ICAM2P13598 275 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 PCOLCEQ15113 449 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 CAPN12Q6ZSI9 719 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 MFSD9Q8NBP5 474 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 KCT2Q8NC54 265 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 FBXO36Q8NEA4 188 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 C5orf34Q96MH7 638 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 TUBB6Q9BUF5 446 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 SGPP1Q9BX95 441 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 RBCK1Q9BYM8 510 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 PHACTR1Q9C0D0 580 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 VN1R1Q9GZP7 353 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 ZNF700Q9H0M5 742 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 SLC5A6Q9Y289 635 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 TEX264Q9Y6I9 313 aa20.86■□□□□ 0.93
LSM6-203ENST00000503982 SPTAN1Q13813 2472 aaKnown RBP20.85■□□□□ 0.93
LSM6-203ENST00000503982 SVILO95425 2214 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 HIVEP3Q5T1R4 2406 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 IGHV3-20A0A0C4DH32 117 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 CTAGE15A4D2H0 777 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 ZNF860A6NHJ4 632 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 ESPNB1AK53 854 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 NDUFS4O43181 175 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 CTAGE8P0CG41 777 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 ITGAMP11215 1152 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 NPPBP16860 134 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 SNRPNP63162 240 aaKnown RBP20.85■□□□□ 0.93
LSM6-203ENST00000503982 MGAT5Q09328 741 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 CSHL1Q14406 222 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 GLE1Q53GS7 698 aaKnown RBP20.85■□□□□ 0.93
LSM6-203ENST00000503982 STEAP4Q687X5 459 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 TMEM214Q6NUQ4 689 aaKnown RBP20.85■□□□□ 0.93
LSM6-203ENST00000503982 TMEM205Q6UW68 189 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 RIPOR1Q6ZS17 1223 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 STRA8Q7Z7C7 330 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 CTAGE6Q86UF2 777 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 CTAGE4Q8IX94 777 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 ST6GALNAC3Q8NDV1 305 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 SUN3Q8TAQ9 357 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 FBXL8Q96CD0 374 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 TSNARE1Q96NA8 513 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 EGFL8Q99944 293 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 FAM129AQ9BZQ8 928 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 SNX24Q9Y343 169 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 NAALAD2Q9Y3Q0 740 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 CPAMD8Q8IZJ3 1885 aa20.85■□□□□ 0.93
LSM6-203ENST00000503982 ZGRF1Q86YA3 2104 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 LOC102723996A0A087X1L8 192 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 A8MUI8 341 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 TSPAN12O95859 305 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 ENO2P09104 434 aaPredicted RBP20.84■□□□□ 0.93
LSM6-203ENST00000503982 RPL21P46778 160 aaKnown RBP20.84■□□□□ 0.93
LSM6-203ENST00000503982 ZNF33BQ06732 778 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 BTBD16Q32M84 506 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 ABHD17BQ5VST6 288 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 LANCL3Q6ZV70 420 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 FRA10AC1Q70Z53 315 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 CPEB2Q7Z5Q1 589 aaKnown RBP20.84■□□□□ 0.93
LSM6-203ENST00000503982 PEX11GQ96HA9 241 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms