RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CRYBG2Q8N1P7 616 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 TOP6BLQ8N6T0 577 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 PACRGLQ8N7B6 248 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 RORBQ92753 470 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 MTFMTQ96DP5 389 aaKnown RBP5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 SMARCD1Q96GM5 515 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 CXorf58Q96LI9 332 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 CSPG4P5Q96PW8 444 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 TTLL2Q9BWV7 592 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 ATXN3LQ9H3M9 355 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 PRDM12Q9H4Q4 367 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 MRM3Q9HC36 420 aaKnown RBP5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 IL1RAPQ9NPH3 570 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 NECTIN3Q9NQS3 549 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 ZNF275Q9NSD4 429 aaPredicted RBP5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 PIGVQ9NUD9 493 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 HPF1Q9NWY4 346 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 B3GNT2Q9NY97 397 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 TRMT6Q9UJA5 497 aaKnown RBP5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 ELF5Q9UKW6 265 aaPredicted RBP5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 COLQQ9Y215 455 aaPredicted RBP5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 NAALAD2Q9Y3Q0 740 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 ALG5Q9Y673 324 aa5.6□□□□□ -1.51
SOX2-OT-218ENST00000498731 PLXNA1Q9UIW2 1896 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 NUP214P35658 2090 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 A0A0U1RQF3 1178 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 A0A1W2PQ45 241 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 A0A1W2PQY0 241 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 MAGEB16A2A368 324 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PMS2P1A4D2B8 440 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ZNF487B1APH4 448 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 LOC110117498-PIK3R3F6TDL0 507 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 NR5A2O00482 541 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ST8SIA5O15466 376 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 SERPINI2O75830 405 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 JCHAINP01591 159 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 IRF1P10914 325 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 SLC6A2P23975 617 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 GKP32189 559 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 GDI2P50395 445 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CYP4F2P78329 520 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CYP4F3Q08477 520 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TRAP1Q12931 704 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TRAF3Q13114 568 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 FGFBP1Q14512 234 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PDK2Q15119 407 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ETFDHQ16134 617 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 RPS26P11Q5JNZ5 115 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 SNX20Q7Z614 316 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 LAX1Q8IWV1 398 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 C8orf59Q8N0T1 100 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ARNTL2Q8WYA1 636 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PTP4A1Q93096 173 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 LRRC39Q96DD0 335 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 EBNA1BP2Q99848 306 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 BARHL1Q9BZE3 327 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 RIBC2Q9H4K1 309 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CYP4F12Q9HCS2 524 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ACOT13Q9NPJ3 140 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 NKIRAS2Q9NYR9 191 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 NPAP1Q9NZP6 1156 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ATXN7L1Q9ULK2 861 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CHD7Q9P2D1 2997 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ASPDHA6ND91 283 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CCDC182A6NF36 153 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 FAM72CH0Y354 149 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 H3BM21 787 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 RFXAPO00287 272 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 LRRTM2O43300 516 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 MFSD11O43934 449 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 GPIP06744 558 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 BMP1P13497 986 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ERCC2P18074 760 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PSMA4P25789 261 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 MGAT1P26572 445 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TNFSF8P32971 234 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CCT3P49368 545 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 POU4F1Q01851 419 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 EXOSC2Q13868 293 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 HFEQ30201 348 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TRIM60Q495X7 471 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 FAM72AQ5TYM5 149 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 FAM72DQ6L9T8 149 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 FSTL4Q6MZW2 842 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ENPP6Q6UWR7 440 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 ALKAL1Q6UXT8 129 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 SLC26A9Q7LBE3 791 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 FAM72BQ86X60 149 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CDKL3Q8IVW4 592 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CDH26Q8IXH8 852 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TTC9BQ8N6N2 239 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 COLGALT1Q8NBJ5 622 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 OR10T2Q8NGX3 314 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PNPT1Q8TCS8 783 aaKnown RBP5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 C2CD4CQ8TF44 421 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 C19orf60Q96EN9 201 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TAAR9Q96RI9 348 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms