RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PGAP3Q96FM1 320 aaPredicted RBP2.83□□□□□ -1.96
SMC4-227ENST00000497984 OTUB1Q96FW1 271 aaPredicted RBP2.83□□□□□ -1.96
SMC4-227ENST00000497984 LINC00615Q96LM1 132 aaPredicted RBP2.83□□□□□ -1.96
SMC4-227ENST00000497984 PSMB7Q99436 277 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 CCDC3Q9BQI4 270 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 SDCBP2Q9H190 292 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 ACTL8Q9H568 366 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 LNPEPQ9UIQ6 1025 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 TDRD6O60522 2096 aaKnown RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 IGLV4-3A0A075B6K6 122 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 NPIPB9F8W1W9 429 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 K7EQD1 137 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 SPRY1O43609 319 aaPredicted RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 CELF2O95319 508 aaKnown RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 ACSL3O95573 720 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 KRT6AP02538 564 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 KRT6BP04259 564 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 MYL6BP14649 208 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 ACHEP22303 614 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 AADACP22760 399 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 CD27P26842 260 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 DRD3P35462 400 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 HSD17B3P37058 310 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 KRT6CP48668 564 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 DCDC1P59894 354 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 ACSM1Q08AH1 577 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 AIMP1Q12904 312 aaKnown RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 EIF4EBP2Q13542 120 aaPredicted RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 TMEM132DQ14C87 1099 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 FAM189A2Q15884 450 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 KRT80Q6KB66 452 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 CHMP1BQ7LBR1 199 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 PLPPR4Q7Z2D5 763 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 MFN1Q8IWA4 741 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 CCDC60Q8IWA6 550 aaPredicted RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 TSACCQ96A04 125 aaPredicted RBP2.82□□□□□ -1.96
SMC4-227ENST00000497984 SPSB1Q96BD6 273 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 ATF6BQ99941 703 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 SLF1Q9BQI6 1058 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 SLC2A11Q9BYW1 496 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 ADNPQ9H2P0 1102 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 DNAJC4Q9NNZ3 241 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 IL36AQ9UHA7 158 aa2.82□□□□□ -1.96
SMC4-227ENST00000497984 SLC1A7O00341 560 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 SURF4O15260 269 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 AP5Z1O43299 807 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 TADA2AO75478 443 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 BAG3O95817 575 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 AKR1B1P15121 316 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 CYP11B2P19099 503 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 CETN2P41208 172 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 CACNG1Q06432 222 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 PRPF4BQ13523 1007 aaKnown RBP2.81□□□□□ -1.96
SMC4-227ENST00000497984 TRA2AQ13595 282 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMC4-227ENST00000497984 TMEM266Q2M3C6 531 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 KHDRBS2Q5VWX1 349 aaKnown RBP2.81□□□□□ -1.96
SMC4-227ENST00000497984 RNLSQ5VYX0 342 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 CTR9Q6PD62 1173 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 PRSS55Q6UWB4 352 aaPredicted RBP2.81□□□□□ -1.96
SMC4-227ENST00000497984 CCBE1Q6UXH8 406 aaPredicted RBP2.81□□□□□ -1.96
SMC4-227ENST00000497984 C3P1Q6ZMU1 363 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 SLC24A5Q71RS6 500 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 C11orf42Q8N5U0 333 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 PI4KAP1Q8N8J0 262 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 OR10G7Q8NGN6 311 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 SEPT1Q8WYJ6 367 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 C2orf48Q96LS8 159 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 ZIM3Q96PE6 472 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 BTBD9Q96Q07 612 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 SLC25A23Q9BV35 468 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 BCCIPQ9P287 314 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMC4-227ENST00000497984 TTLL3Q9Y4R7 772 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 UMODL1Q5DID0 1318 aa2.81□□□□□ -1.96
SMC4-227ENST00000497984 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.8□□□□□ -1.96
SMC4-227ENST00000497984 CCDC188H7C350 402 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 TRAFD1O14545 582 aaPredicted RBP2.8□□□□□ -1.96
SMC4-227ENST00000497984 NXPH4O95158 308 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 GSRP00390 522 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 OR52Z1P0C646 297 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 CPT2P23786 658 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 PSMA3P25788 255 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 EEF1DP29692 281 aaKnown RBP2.8□□□□□ -1.96
SMC4-227ENST00000497984 RAD52P43351 418 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 PRELPP51888 382 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 RASGEF1BQ0VAM2 473 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 ZNF177Q13360 481 aaPredicted RBP2.8□□□□□ -1.96
SMC4-227ENST00000497984 PTGISQ16647 500 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 KYNUQ16719 465 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 FAM174BQ3ZCQ3 159 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 TCP11X2Q5H9J9 407 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 FGD3Q5JSP0 725 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 CD177Q8N6Q3 437 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 RTL3Q8N8U3 475 aaKnown RBP2.8□□□□□ -1.96
SMC4-227ENST00000497984 SLC4A11Q8NBS3 891 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 KCTD6Q8NC69 237 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 RMDN2Q96LZ7 410 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 KLHL5Q96PQ7 755 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 EGLN3Q9H6Z9 239 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 TBC1D13Q9NVG8 400 aa2.8□□□□□ -1.96
SMC4-227ENST00000497984 TRBV4-1A0A0J9YWV2 114 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms