RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 DARSP14868 501 aaKnown RBP4.44□□□□□ -1.7
MDM2-220ENST00000496959 ALOX12P18054 663 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 CDH13P55290 713 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 TMEM50BP56557 158 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 MAT1AQ00266 395 aaKnown RBP4.44□□□□□ -1.7
MDM2-220ENST00000496959 GCNT1Q02742 428 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 CALCOCO2Q13137 446 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 CA9Q16790 459 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 RILPL1Q5EBL4 403 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 ZNF343Q6P1L6 599 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 GPRIN3Q6ZVF9 776 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 TMPRSS11BQ86T26 416 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 NUP37Q8NFH4 326 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 OR10S1Q8NGN2 331 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 NSUN4Q96CB9 384 aaKnown RBP4.44□□□□□ -1.7
MDM2-220ENST00000496959 SPDL1Q96EA4 605 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 CFAP53Q96M91 514 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 FOXN4Q96NZ1 517 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 SEPHS2Q99611 448 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 BARD1Q99728 777 aaKnown RBP4.44□□□□□ -1.7
MDM2-220ENST00000496959 MRPL1Q9BYD6 325 aaKnown RBP4.44□□□□□ -1.7
MDM2-220ENST00000496959 MTMR12Q9C0I1 747 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 THAP2Q9H0W7 228 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 SLC35C2Q9NQQ7 365 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 ADD3Q9UEY8 706 aaKnown RBP4.44□□□□□ -1.7
MDM2-220ENST00000496959 MUTYHQ9UIF7 546 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 NIP7Q9Y221 180 aaKnown RBP eCLIP4.44□□□□□ -1.7
MDM2-220ENST00000496959 PADI2Q9Y2J8 665 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 FEZF1A0PJY2 475 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 MPTX1A8MV57 137 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 ERVV-1B6SEH8 477 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 SRSF10O75494 262 aaKnown RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 C22orf31O95567 290 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 HMOX1P09601 288 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 DNASE1P24855 282 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 HLA-FP30511 346 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 PTGER3P43115 390 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 TSFMP43897 325 aaKnown RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 GUCY2DQ02846 1103 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 HSPB3Q12988 150 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 PKN2Q16513 984 aaKnown RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 UGT3A2Q3SY77 523 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 MOGAT2Q3SYC2 334 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 CRY2Q49AN0 593 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 FAM205BPQ63HN1 556 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 ZNF774Q6NX45 483 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 KIF6Q6ZMV9 814 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 ARHGAP22Q7Z5H3 698 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 MINDY1Q8N5J2 469 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 Q8NBF4 154 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 RASL10AQ92737 203 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 SYN2Q92777 582 aaPredicted RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 THOC1Q96FV9 657 aaKnown RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 TRIM6Q9C030 488 aaPredicted RBP4.43□□□□□ -1.7
MDM2-220ENST00000496959 MED20Q9H944 212 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 BLOC1S4Q9NUP1 217 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 NUDCQ9Y266 331 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 LRRC37AA6NMS7 1700 aa4.43□□□□□ -1.7
MDM2-220ENST00000496959 LAMB2P55268 1798 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 DLG5Q8TDM6 1919 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 PSME4Q14997 1843 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 IGHV3OR16-10A0A075B7F0 116 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 hCG_1807616A0A1W2PRN6 198 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 PPIP5K2O43314 1243 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 CELF2O95319 508 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 DANCRP0C864 163 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 RBMS1P29558 406 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 PGFP49763 221 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 ZNF75DP51815 510 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 GEMIN4P57678 1058 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 SNAPC1Q16533 368 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 CBWD6Q4V339 395 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 PARP10Q53GL7 1025 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 CBWD3Q5JTY5 395 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 ITPRIPL1Q6GPH6 555 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 UGT3A1Q6NUS8 523 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 PPP1R42Q7Z4L9 355 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 Q8N377 158 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 THAP8Q8NA92 274 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 APOBEC4Q8WW27 367 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 PRPF31Q8WWY3 499 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 SLC22A18Q96BI1 424 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 RSRC1Q96IZ7 334 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 FAM20AQ96MK3 541 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 SOSTQ9BQB4 213 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 RAB11FIP5Q9BXF6 653 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 CHST11Q9NPF2 352 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 TBC1D22BQ9NU19 505 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 TBC1D29Q9UFV1 150 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 FBXO2Q9UK22 296 aaPredicted RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 TDRD15B5MCY1 1934 aaKnown RBP4.42□□□□□ -1.7
MDM2-220ENST00000496959 PAPPA2Q9BXP8 1791 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 PCNTO95613 3336 aa4.42□□□□□ -1.7
MDM2-220ENST00000496959 RBBP6Q7Z6E9 1792 aaKnown RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 A0A1W2PR80 420 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 ANKRD18BA2A2Z9 1011 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 NEMP2A6NFY4 417 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 EPM2AB3EWF7 344 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms