RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TREM1Q9NP99 234 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 MIOSQ9NXC5 875 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 ZIM2Q9NZV7 527 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 AAR2Q9Y312 384 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC2A4P14672 509 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 CBR1P16152 277 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 EFNA1P20827 205 aaPredicted RBP7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 ADRA1BP35368 520 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 RFX2P48378 723 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 HSPA7P48741 367 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 EVX2Q03828 476 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC9A5Q14940 896 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 TDRD10Q5VZ19 366 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC25A25Q6KCM7 469 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC27A4Q6P1M0 643 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 DTWD1Q8N5C7 304 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 ELP4Q96EB1 424 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 SENP8Q96LD8 212 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 SFXN2Q96NB2 322 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 MBOAT4Q96T53 435 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 PKMYT1Q99640 499 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 IFT27Q9BW83 186 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 PAPOLGQ9BWT3 736 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 MTG2Q9H4K7 406 aa7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 ELAC1Q9H777 363 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 ATF5Q9Y2D1 282 aaPredicted RBP7.94□□□□□ -1.14
CRNKL1-205ENST00000496549 PRAMEF2O60811 474 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ANXA9O76027 345 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ALDOBP05062 364 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 HMBSP08397 361 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 SBK2P0C263 348 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 SFTPCP11686 197 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 GMPSP49915 693 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 RAB5CP51148 216 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 KIAA1024LP59773 190 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 BLOC1S1P78537 153 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 LAPTM4AQ15012 233 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 MICAQ29983 383 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 EXOC3L2Q2M3D2 409 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 SPDYE7PQ495Y7 208 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 SPOUT1Q5T280 376 aaKnown RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 RAB12Q6IQ22 244 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 FAM122BQ7Z309 247 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 KANSL1Q7Z3B3 1105 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ZBTB8OSQ8IWT0 167 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ZFP82Q8N141 532 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 DNAJC5GQ8N7S2 189 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CAMKVQ8NCB2 501 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 KCNC2Q96PR1 638 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 FICDQ9BVA6 458 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ZCCHC2Q9C0B9 1178 aaKnown RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 COMMD9Q9P000 198 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 FBXL2Q9UKC9 423 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 PCDHA9Q9Y5H5 950 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 NUBP2Q9Y5Y2 271 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 LOC105369274A0A096LPK9 316 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 LCHNA4D1U4 455 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 POM121BA6NF01 834 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 TRABD2BA6NFA1 517 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 FAM170BA6NMN3 283 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ABCD4O14678 606 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC19A2O60779 497 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CREG1O75629 220 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 MLYCDO95822 493 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ADH1CP00326 375 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CFHP08603 1231 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 H2AFB2P0C5Z0 115 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 RD3LP0DJH9 198 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 HPGDP15428 266 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ZNF460Q14592 562 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ENPP6Q6UWR7 440 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 LHFPL3Q86UP9 236 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CCDC71Q8IV32 467 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 OR4N4Q8N0Y3 316 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 GOT1L1Q8NHS2 421 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 UBA3Q8TBC4 463 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 C3orf49Q96BT1 292 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 RTP4Q96DX8 246 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 FCRL1Q96LA6 429 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 LGMNQ99538 433 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 WDR77Q9BQA1 342 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 OPA3Q9H6K4 179 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 TOPAZ1Q8N9V7 1692 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 LMO7Q8WWI1 1683 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 C5orf58C9J3I9 102 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 ADAMDEC1O15204 470 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 HRO43593 1189 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 PAK4O96013 591 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CSF3P09919 207 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 RHCEP18577 417 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 RELQ04864 619 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CRYZQ08257 329 aaKnown RBP7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 HYAL2Q12891 473 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 SEC23BQ15437 767 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CDNFQ49AH0 187 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 CNIH2Q6PI25 160 aa7.93□□□□□ -1.14
CRNKL1-205ENST00000496549 METAP1DQ6UB28 335 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms