RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CLEC16AQ2KHT3 1053 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 ANKRD34AQ69YU3 496 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 ABHD17CQ6PCB6 329 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 RNF44Q7L0R7 432 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 FAM109AQ8N4B1 249 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 TMEM156Q8N614 296 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 CSNK1A1LQ8N752 337 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 C9orf106Q8NAJ2 232 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 BLOC1S5Q8TDH9 187 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 DHTKD1Q96HY7 919 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-219ENST00000495172 LPAR4Q99677 370 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 MACROD1Q9BQ69 325 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 PCDH18Q9HCL0 1135 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 SMOXQ9NWM0 555 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 TUBA8Q9NY65 449 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-219ENST00000495172 C19orf25Q9UFG5 118 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-219ENST00000495172 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 CDC14AQ9UNH5 594 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 PCDHA3Q9Y5H8 950 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 NFS1Q9Y697 457 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 EPN1Q9Y6I3 576 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-219ENST00000495172 SCINQ9Y6U3 715 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 FAM169AQ9Y6X4 670 aa8.19□□□□□ -1.1
GARNL3-219ENST00000495172 HEATR5BQ9P2D3 2071 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 CADP27708 2225 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ANKRD62A6NC57 917 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 PRKNO60260 465 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-219ENST00000495172 KIAA0513O60268 411 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 OR6B1O95007 311 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 F13A1P00488 732 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 SOD3P08294 240 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 CRYGSP22914 178 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 CTSSP25774 331 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 CCKARP32238 428 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ARL4AP40617 200 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 OR4D2P58180 307 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 RHAGQ02094 409 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 FOXO1Q12778 655 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 SLC10A2Q12908 348 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-219ENST00000495172 GRB7Q14451 532 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 NSDHLQ15738 373 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 XKR6Q5GH73 641 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 NCBP2-AS2Q69YL0 99 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 IL20RBQ6UXL0 311 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
GARNL3-219ENST00000495172 PHF13Q86YI8 300 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-219ENST00000495172 TBC1D21Q8IYX1 336 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ZNF441Q8N8Z8 693 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 OR51Q1Q8NH59 317 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 OR5K2Q8NHB8 316 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 SLC44A1Q8WWI5 657 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 HTRA1Q92743 480 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ART5Q96L15 291 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 TNFRSF13CQ96RJ3 184 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 TRIB1Q96RU8 372 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 DRC3Q9H069 523 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ZNF696Q9H7X3 374 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 RMND1Q9NWS8 449 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 NDRG3Q9UGV2 375 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ERVK-11Q9UQG0 969 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 ARL5AQ9Y689 179 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 MED12LQ86YW9 2145 aa8.18□□□□□ -1.1
GARNL3-219ENST00000495172 FAM237AA0A1B0GTK4 181 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 SGK494L7N484 410 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 SSX4O60224 188 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 SUSD5O60279 629 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 NDST3O95803 873 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 CALB1P05937 261 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 CCDC166P0CW27 439 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 ATP1B2P14415 290 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 CD9P21926 228 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 TIMP3P35625 211 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 MC3RP41968 323 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 COMPP49747 757 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 VLDLRP98155 873 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 GBE1Q04446 702 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 FAPQ12884 760 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 ITGA9Q13797 1035 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 SLC10A1Q14973 349 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 DPYSL2Q16555 572 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 SIRPB2Q5JXA9 342 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 KLHDC7AQ5VTJ3 777 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 CYB5R2Q6BCY4 276 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 ZNF704Q6ZNC4 412 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 PLD3Q8IV08 490 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 CFAP61Q8NHU2 1237 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 GCDHQ92947 438 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 IMP4Q96G21 291 aaKnown RBP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 DCUN1D1Q96GG9 259 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 PKP2Q99959 881 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 MED18Q9BUE0 208 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 ACAT2Q9BWD1 397 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 RAB11FIP5Q9BXF6 653 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 MANSC1Q9H8J5 431 aa8.17□□□□□ -1.1
GARNL3-219ENST00000495172 INTS7Q9NVH2 962 aaKnown RBP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.17□□□□□ -1.1
GARNL3-219ENST00000495172 MAN1B1Q9UKM7 699 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms