RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SOCS6O14544 535 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 LCMT2O60294 686 aaKnown RBP16.74■□□□□ 0.27
HDAC4-211ENST00000494800 ITGA3P26006 1051 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 AHRP35869 848 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 TLE1Q04724 770 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 MYBPC3Q14896 1274 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 EFTUD2Q15029 972 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■□□ 17.4
HDAC4-211ENST00000494800 ABHD13Q7L211 337 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 TAOK1Q7L7X3 1001 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 AMER3Q8N944 861 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 TRPV3Q8NET8 790 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 ZCCHC10Q8TBK6 192 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 MRRFQ96E11 262 aaKnown RBP16.74■□□□□ 0.27
HDAC4-211ENST00000494800 NUDT9Q9BW91 350 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 ACSS3Q9H6R3 686 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 NINJ2Q9NZG7 142 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 GPRC5BQ9NZH0 403 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 ZFP69BQ9UJL9 534 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 ACOT9Q9Y305 439 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 SLC22A7Q9Y694 548 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 ZNF462Q96JM2 2506 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 IDSB3KWA1 339 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 ACSL3O95573 720 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 PDGFAP04085 211 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 LTA4HP09960 611 aaKnown RBP16.73■□□□□ 0.27
HDAC4-211ENST00000494800 SLC35E2BP0CK96 405 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 IL1RNP18510 177 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 SCTRP47872 440 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 SLC6A12P48065 614 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 SOX8P57073 446 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 REEP5Q00765 189 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 CDC16Q13042 620 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 RAPSNQ13702 412 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
HDAC4-211ENST00000494800 FAM83EQ2M2I3 478 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 MFSD4BQ5TF39 518 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 MROH9Q5TGP6 573 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 KIRREL2Q6UWL6 708 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 CMC1Q7Z7K0 106 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 IFT20Q8IY31 132 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 KLHDC8AQ8IYD2 350 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 KRT78Q8N1N4 520 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 KCT2Q8NC54 265 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 TTLQ8NG68 377 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 OR11G2Q8NGC1 345 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 METTL21AQ8WXB1 218 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 SMAD5Q99717 465 aaKnown RBP16.73■□□□□ 0.27
HDAC4-211ENST00000494800 MACROD1Q9BQ69 325 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 EPN3Q9H201 632 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 CDC42EP4Q9H3Q1 356 aaKnown RBP16.73■□□□□ 0.27
HDAC4-211ENST00000494800 DNAJC11Q9NVH1 559 aa16.73■□□□□ 0.27
HDAC4-211ENST00000494800 CCDC189A1A4V9 331 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 SYCE1LA8MT33 242 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 FFAR3O14843 346 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 CLGNO14967 610 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 GPR42O15529 346 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 STK16O75716 305 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 HPP00738 406 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 INHBAP08476 426 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 CYC1P08574 325 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 C1GALT1C1LP0DN25 315 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 TFEBP19484 476 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 GSTM2P28161 218 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 HPDP32754 393 aaPredicted RBP16.72■□□□□ 0.27
HDAC4-211ENST00000494800 GGT5P36269 586 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 GDF5P43026 501 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 SERPINB8P50452 374 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 OR4D1Q15615 310 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 KLC3Q6P597 504 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 PDPRQ8NCN5 879 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 OR51Q1Q8NH59 317 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 NT5CQ8TCD5 201 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 EXT2Q93063 718 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 TRIM4Q9C037 500 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 PITHD1Q9GZP4 211 aaPredicted RBP16.72■□□□□ 0.27
HDAC4-211ENST00000494800 ALG9Q9H6U8 611 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 NUDT4Q9NZJ9 180 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 MKL2Q9ULH7 1088 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 MRPS2Q9Y399 296 aaKnown RBP16.72■□□□□ 0.27
HDAC4-211ENST00000494800 NAALAD2Q9Y3Q0 740 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 FER1L5A0AVI2 2057 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 SEC16AO15027 2179 aa16.72■□□□□ 0.27
HDAC4-211ENST00000494800 TLN1Q9Y490 2541 aaKnown RBP16.71■□□□□ 0.27
HDAC4-211ENST00000494800 NSG1A0A0A6YYJ2 146 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SUPT3HB4E1H0 165 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SGK494L7N484 410 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 KERAO60938 352 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SUPT3HO75486 399 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 KLHL18O94889 574 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 WISP1O95388 367 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 BMP10O95393 424 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 ALOX12P18054 663 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 IL10P22301 178 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 TYK2P29597 1187 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 XCR1P46094 333 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 CSRP3P50461 194 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 AP2B1P63010 937 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 MAT1AQ00266 395 aaKnown RBP16.71■□□□□ 0.27
HDAC4-211ENST00000494800 BMPR2Q13873 1038 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 PDK4Q16654 411 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms