RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 LRRC8EQ6NSJ5 796 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 FAM45BPQ6NSW5 357 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 TMEM205Q6UW68 189 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 LCTLQ6UWM7 567 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SBSNQ6UWP8 590 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 LANCL3Q6ZV70 420 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 NDUFAF7Q7L592 441 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 GALNT7Q86SF2 657 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 ASPGQ86U10 573 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 CEP97Q8IW35 865 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SPATA6LQ8N4H0 392 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SIRT6Q8N6T7 355 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 MFSD9Q8NBP5 474 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 OR5T3Q8NGG3 340 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 OR56A3Q8NH54 315 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 DNAJB14Q8TBM8 379 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 FAM45AQ8TCE6 357 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 BRIX1Q8TDN6 353 aaKnown RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SLC13A3Q8WWT9 602 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 FBXL8Q96CD0 374 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 LRRC39Q96DD0 335 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 TM4SF19Q96DZ7 209 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 HIST1H2AHQ96KK5 128 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 CNDP1Q96KN2 507 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 RUNDC3BQ96NL0 473 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 HIST1H2AJQ99878 128 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 WDR77Q9BQA1 342 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 H2AFJQ9BTM1 129 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 RBCK1Q9BYM8 510 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 TGIF2Q9GZN2 237 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 VN1R1Q9GZP7 353 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 DPH5Q9H2P9 285 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 MKKSQ9NPJ1 570 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 MOCS1Q9NZB8 636 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 PTGFRNQ9P2B2 879 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 COPG1Q9Y678 874 aaKnown RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 NBPF19A0A087WUL8 3843 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 USP9YO00507 2555 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 LOC102723996A0A087X1L8 192 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 FAM95CA0A1B0GW59 222 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 H0YIG0 161 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 TXNDC9O14530 226 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 PRPF4O43172 522 aaKnown RBP eCLIP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 RAD51CO43502 376 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 OR1F1O43749 312 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 RDH16O75452 317 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 AGFG2O95081 481 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 NSA2O95478 260 aaKnown RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 SERPINA7P05543 415 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 ITGAMP11215 1152 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 ZNF37AP17032 561 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 HRH2P25021 359 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CXCR2P25025 360 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 SOX11P35716 441 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 GMPRP36959 345 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 AVPR1BP47901 424 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CCR8P51685 355 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 OLR1P78380 273 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 MFAP5Q13361 173 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 FRG1Q14331 258 aaKnown RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 NDUFA9Q16795 377 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 PPP1R3AQ16821 1122 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 MINDY4Q4G0A6 757 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 MFSD4BQ5TF39 518 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 IRAK1BP1Q5VVH5 260 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 DUPD1Q68J44 220 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CAPN13Q6MZZ7 669 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 BLOC1S3Q6QNY0 202 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 ISLR2Q6UXK2 745 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 KBTBD2Q8IY47 623 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 ZBED8Q8IZ13 594 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CAMKVQ8NCB2 501 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 SPATA4Q8NEY3 305 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 ABHD11Q8NFV4 315 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 OR4K1Q8NGD4 311 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 OR51Q1Q8NH59 317 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 GABPB2Q8TAK5 448 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 PPP4R1Q8TF05 950 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 TM9SF4Q92544 642 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 NEIL2Q969S2 332 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 IMMP1LQ96LU5 166 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 TSNARE1Q96NA8 513 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CYTH2Q99418 400 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 BARD1Q99728 777 aaKnown RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 MCMBPQ9BTE3 642 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 PCBD2Q9H0N5 130 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CAB39LQ9H9S4 337 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 SAYSD1Q9NPB0 183 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 C14orf105Q9NVL8 296 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 GRHL1Q9NZI5 618 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 ZFATQ9P243 1243 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 CORO1CQ9ULV4 474 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 MTO1Q9Y2Z2 717 aaKnown RBP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 NAALAD2Q9Y3Q0 740 aa8.07□□□□□ -1.12
LRCH3-219ENST00000494069 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.07□□□□□ -1.12
LRCH3-219ENST00000494069 A0A1W2PQ72 361 aa8.06□□□□□ -1.12
LRCH3-219ENST00000494069 C4orf51C9J302 202 aa8.06□□□□□ -1.12
LRCH3-219ENST00000494069 NDUFS4O43181 175 aa8.06□□□□□ -1.12
LRCH3-219ENST00000494069 KLHL41O60662 606 aa8.06□□□□□ -1.12
LRCH3-219ENST00000494069 CDC123O75794 336 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms