RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PELI2Q9HAT8 420 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 IL1RL2Q9HB29 575 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ATAD3AQ9NVI7 634 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 FAM120CQ9NX05 1096 aaKnown RBP9.67□□□□□ -0.86
PRPF3-206ENST00000493553 CMTM6Q9NX76 183 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 PDP2Q9P2J9 529 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ZNHIT2Q9UHR6 403 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 RIMS3Q9UJD0 308 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ANAPC2Q9UJX6 822 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 HEBP2Q9Y5Z4 205 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 IGLON5A6NGN9 336 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 EVPLLA8MZ36 301 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 CACNB4O00305 520 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ARPC2O15144 300 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 GSTA4O15217 222 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 MID1O15344 667 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 RNASEH2AO75792 299 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 C1GALT1C1LP0DN25 315 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 MYCLP1P12525 358 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ZNF8P17098 575 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 AMD1P17707 334 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 IL1RNP18510 177 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 HRH2P25021 359 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 PTX3P26022 381 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ACADLP28330 430 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 NDUFS1P28331 727 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 DRD3P35462 400 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 GRIA3P42263 894 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 KIR2DL1P43626 348 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ZFP36L2P47974 494 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 GALK1P51570 392 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 RPS26P62854 115 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 CDK3Q00526 305 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 HMGCS1Q01581 520 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 HTR4Q13639 388 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 KIAA0040Q15053 153 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 CCDC85BQ15834 202 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 FAM174BQ3ZCQ3 159 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 EOGTQ5NDL2 527 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 C6orf10Q5SRN2 563 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 LRIF1Q5T3J3 769 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 NOXRED1Q6NXP6 359 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ERICH5Q6P6B1 374 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 PARM1Q6UWI2 310 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 LCTLQ6UWM7 567 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 DLEU7Q6UYE1 221 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 GPR180Q86V85 440 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 HEATR4Q86WZ0 1026 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 HORMAD1Q86X24 394 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 SYT12Q8IV01 421 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 LAS2Q8IYD9 372 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ANKFN1Q8N957 763 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 PAPD5Q8NDF8 572 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 TRPV3Q8NET8 790 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 DNAJB14Q8TBM8 379 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 WDR20Q8TBZ3 569 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ZNF480Q8WV37 535 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 SLC5A11Q8WWX8 675 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 TFGQ92734 400 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 GTF2H4Q92759 462 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 N4BP2L2Q92802 583 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 NELL1Q92832 810 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 PPWD1Q96BP3 646 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 MTERF3Q96E29 417 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 CENPNQ96H22 339 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 C9orf16Q9BUW7 83 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ACTL8Q9H568 366 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 MVB12BQ9H7P6 319 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 NT5DC2Q9H857 520 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 GORASP2Q9H8Y8 452 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 SGK2Q9HBY8 427 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 INTS7Q9NVH2 962 aaKnown RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 FBXL12Q9NXK8 326 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 CLEC1BQ9P126 229 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-206ENST00000493553 ASF1AQ9Y294 204 aa9.66□□□□□ -0.86
PRPF3-206ENST00000493553 DENRO43583 198 aaKnown RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 PLRG1O43660 514 aaKnown RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 ANXA6P08133 673 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 CDH1P12830 882 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 POU3F3P20264 500 aaPredicted RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 IL12AP29459 219 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 PBLDP30039 288 aaPredicted RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 NUDT1P36639 197 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 MESP2Q0VG99 397 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 MTAPQ13126 283 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 WSCD2Q2TBF2 565 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 FAM98BQ52LJ0 330 aaKnown RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 PAGE3Q5JUK9 113 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 INTS11Q5TA45 600 aaKnown RBP9.65□□□□□ -0.86
PRPF3-206ENST00000493553 THEMIS2Q5TEJ8 643 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 IKBIPQ70UQ0 350 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 ERMP1Q7Z2K6 904 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 PAGE2Q7Z2X7 111 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 CAMKMTQ7Z624 323 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 C17orf64Q86WR6 236 aa9.65□□□□□ -0.86
PRPF3-206ENST00000493553 KIAA2013Q8IYS2 634 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms