RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MRPL57Q9BQC6 102 aaKnown RBP12.17□□□□□ -0.46
CLIP2-209ENST00000493166 MRPL46Q9H2W6 279 aaKnown RBP12.17□□□□□ -0.46
CLIP2-209ENST00000493166 ZNF304Q9HCX3 659 aa12.17□□□□□ -0.46
CLIP2-209ENST00000493166 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
CLIP2-209ENST00000493166 RAB21Q9UL25 225 aa12.17□□□□□ -0.46
CLIP2-209ENST00000493166 TCFL5Q9UL49 500 aa12.17□□□□□ -0.46
CLIP2-209ENST00000493166 CDC14AQ9UNH5 594 aa12.17□□□□□ -0.46
CLIP2-209ENST00000493166 ANGPTL3Q9Y5C1 460 aa12.17□□□□□ -0.46
CLIP2-209ENST00000493166 TLDC2A0PJX2 215 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 CDC14CA4D256 554 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 PRPF4O43172 522 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 KLK8O60259 260 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 RECKO95980 971 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 EPB42P16452 691 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 FBLP22087 321 aaKnown RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 IRF8Q02556 426 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 RGS1Q08116 209 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 IL10RAQ13651 578 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 FAM53BQ14153 422 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 NAA30Q147X3 362 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 RASA2Q15283 850 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 XKR6Q5GH73 641 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 FAM69BQ5VUD6 431 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 TMEM214Q6NUQ4 689 aaKnown RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 TMIGD1Q6UXZ0 262 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 COX15Q7KZN9 410 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 OVCH1Q7RTY7 1134 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 MREGQ8N565 214 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 TEX9Q8N6V9 391 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 PTGR2Q8N8N7 351 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 ANKRD53Q8N9V6 530 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 KCT2Q8NC54 265 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 ZCCHC10Q8TBK6 192 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 PHF21BQ96EK2 531 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 PTCD3Q96EY7 689 aaKnown RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 MMABQ96EY8 250 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 EHD1Q9H4M9 534 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 SLC22A11Q9NSA0 550 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 ZFP69BQ9UJL9 534 aa12.16□□□□□ -0.46
CLIP2-209ENST00000493166 PTRH2Q9Y3E5 179 aaKnown RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 TNPO3Q9Y5L0 923 aaKnown RBP12.16□□□□□ -0.46
CLIP2-209ENST00000493166 A0A0A6YYC8 382 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 A0A1W2PPM1 405 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 I3L1I5 382 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 ONECUT2O95948 504 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 ALBP02768 609 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 ITGB2P05107 769 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 GSTA1P08263 222 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 FURINP09958 794 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 EPORP19235 508 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 EEF1DP29692 281 aaKnown RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 FOLR3P41439 243 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 AVPR1BP47901 424 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 PIK3CGP48736 1102 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 CHIT1Q13231 466 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 PWP1Q13610 501 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 DSG2Q14126 1118 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 DOC2AQ14183 400 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 PCBP2Q15366 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 UGT8Q16880 541 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 DEFB109BQ30KR1 87 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 PAGE2BQ5JRK9 111 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 MRPL14Q6P1L8 145 aaKnown RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 CYP4X1Q8N118 509 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 RIBC1Q8N443 379 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 TRPV3Q8NET8 790 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 TTLQ8NG68 377 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 MOCOSQ96EN8 888 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 WDR34Q96EX3 536 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 EFCAB11Q9BUY7 163 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 YIPF2Q9BWQ6 316 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 PITHD1Q9GZP4 211 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 WDR54Q9H977 334 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 ANKHQ9HCJ1 492 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 PRM3Q9NNZ6 103 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 TMEM216Q9P0N5 145 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 CTSFQ9UBX1 484 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 ZNF282Q9UDV7 671 aaPredicted RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 DCDC2Q9UHG0 476 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 POLHQ9Y253 713 aa12.15□□□□□ -0.46
CLIP2-209ENST00000493166 MRPS2Q9Y399 296 aaKnown RBP12.15□□□□□ -0.46
CLIP2-209ENST00000493166 URADA6NGE7 173 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 ANKDD1BA6NHY2 528 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 LRRC14BA6NHZ5 514 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 FOXO6A8MYZ6 492 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 STX16-NPEPL1H3BU86 382 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 ERVH48-1M5A8F1 160 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 E2F3O00716 465 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 STX16O14662 325 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 FOXS1O43638 330 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 PRAMEF4O60810 478 aa12.14□□□□□ -0.47
CLIP2-209ENST00000493166 CNOT3O75175 753 aaKnown RBP12.14□□□□□ -0.47
CLIP2-209ENST00000493166 GLRA3O75311 464 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms