RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 CCT6BQ92526 530 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 ATP6V1E2Q96A05 226 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 MOCOSQ96EN8 888 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 MMABQ96EY8 250 aaPredicted RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 TMEM109Q9BVC6 243 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 FAM117AQ9C073 453 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 PITHD1Q9GZP4 211 aaPredicted RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 ACTL8Q9H568 366 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 NT5DC2Q9H857 520 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 IPPKQ9H8X2 491 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 PADI2Q9Y2J8 665 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 A0A0A6YYC8 382 aaPredicted RBP13.29□□□□□ -0.28
CCM2-217ENST00000492883 CCDC151A5D8V7 595 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 ANKDD1BA6NHY2 528 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 A8MT66 165 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 I3L1I5 382 aaPredicted RBP13.29□□□□□ -0.28
CCM2-217ENST00000492883 E2F3O00716 465 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCM2-217ENST00000492883 PRAMEF4O60810 478 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 CAPN1P07384 714 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 SBK3P0C264 359 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 PRKAR1AP10644 381 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 NFKB2Q00653 900 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 TBCCQ15814 346 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 KRT71Q3SY84 523 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 PRAMEF9Q5VWM5 478 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 TMEM214Q6NUQ4 689 aaKnown RBP13.29□□□□□ -0.28
CCM2-217ENST00000492883 OVCH1Q7RTY7 1134 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 GOLGA7Q7Z5G4 137 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 SYVN1Q86TM6 617 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 ANKRD53Q8N9V6 530 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 ZCCHC10Q8TBK6 192 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 NT5CQ8TCD5 201 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 PPP4R1Q8TF05 950 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 UBE2E3Q969T4 207 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 WDR34Q96EX3 536 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 MVB12AQ96EY5 273 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 EFCAB11Q9BUY7 163 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
CCM2-217ENST00000492883 ACTR8Q9H981 624 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 ANKHQ9HCJ1 492 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 SLC22A11Q9NSA0 550 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 LGALS13Q9UHV8 139 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
CCM2-217ENST00000492883 AKAP13Q12802 2813 aa13.29□□□□□ -0.28
CCM2-217ENST00000492883 URADA6NGE7 173 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 RGS16O15492 202 aaPredicted RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 FOXS1O43638 330 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 DLX3O60479 287 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 WFS1O76024 890 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 ONECUT2O95948 504 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 ALBP02768 609 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 SERPINA6P08185 405 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CD22P20273 847 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 ITGAXP20702 1163 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 FBLP22087 321 aaKnown RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 ATP5F1P24539 256 aaPredicted RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 GSTM2P28161 218 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 HNF4AP41235 474 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CASP2P42575 452 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 OCA2Q04671 838 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 SLC18A2Q05940 514 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 ZNF844Q08AG5 666 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CCDC153Q494R4 210 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CEP85LQ5SZL2 805 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 MED27Q6P2C8 311 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 SLC22A9Q8IVM8 553 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 SRRM1Q8IYB3 904 aaKnown RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCM2-217ENST00000492883 IQCKQ8N0W5 287 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 ARHGEF39Q8N4T4 335 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 OR9A4Q8NGU2 314 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 FKBP10Q96AY3 582 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CENPHQ9H3R5 247 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 NOL11Q9H8H0 719 aaKnown RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 ZNF490Q9ULM2 529 aaPredicted RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 PTRH2Q9Y3E5 179 aaKnown RBP13.28□□□□□ -0.28
CCM2-217ENST00000492883 SLC22A7Q9Y694 548 aa13.28□□□□□ -0.28
CCM2-217ENST00000492883 CDC14CA4D256 554 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 H0YIG0 161 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 SUPT7LO94864 414 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 RECKO95980 971 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 MYL2P10916 166 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 PCNAP12004 261 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 IL1RNP18510 177 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 FOLR3P41439 243 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 CCNG1P51959 295 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 STXBP1P61764 594 aaKnown RBP13.27□□□□□ -0.29
CCM2-217ENST00000492883 HERVK_113P63132 956 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 CDC20Q12834 499 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms