RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NDUFS4O43181 175 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 WDR47O94967 919 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 NSA2O95478 260 aaKnown RBP23.39■■□□□ 1.33
UPF3A-209ENST00000492270 TUBB4AP04350 444 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 SLC35E2BP0CK96 405 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 VARSP26640 1264 aaKnown RBP23.39■■□□□ 1.33
UPF3A-209ENST00000492270 ECHS1P30084 290 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 HNMTP50135 292 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 REEP5Q00765 189 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 DLG1Q12959 904 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 BMPR2Q13873 1038 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 MYBPC3Q14896 1274 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 FAAH2Q6GMR7 532 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 IFT81Q8WYA0 676 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 MFRPQ9BY79 579 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 TGIF2Q9GZN2 237 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 ZNF552Q9H707 407 aaPredicted RBP23.39■■□□□ 1.33
UPF3A-209ENST00000492270 PELI2Q9HAT8 420 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 C14orf105Q9NVL8 296 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 HCN3Q9P1Z3 774 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 PCDHGB7Q9Y5F8 929 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 MYO18BQ8IUG5 2567 aa23.39■■□□□ 1.33
UPF3A-209ENST00000492270 H0YIG0 161 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 SGK494L7N484 410 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 TAPBPO15533 448 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 JRKO75564 520 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 WISP1O95388 367 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 SLC35G6P0C7Q6 338 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 ITGA3P26006 1051 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 SCTRP47872 440 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 EMP2P54851 167 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 ATP6V0D1P61421 351 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 AIMP2Q13155 320 aaKnown RBP23.38■■□□□ 1.33
UPF3A-209ENST00000492270 VWA5B1Q5TIE3 1220 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 NXPE4Q6UWF7 544 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 RAPH1Q70E73 1250 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 GPSM1Q86YR5 675 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 PARP9Q8IXQ6 854 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 KLHDC8AQ8IYD2 350 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 ANKRD53Q8N9V6 530 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 KIF18AQ8NI77 898 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 EXT2Q93063 718 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 ESAMQ96AP7 390 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 CDC42EP4Q9H3Q1 356 aaKnown RBP23.38■■□□□ 1.33
UPF3A-209ENST00000492270 MTRF1LQ9UGC7 380 aaKnown RBP23.38■■□□□ 1.33
UPF3A-209ENST00000492270 KCNE2Q9Y6J6 123 aa23.38■■□□□ 1.33
UPF3A-209ENST00000492270 ZNF860A6NHJ4 632 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 MAP2K7O14733 419 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 RDH16O75452 317 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 SERPIND1P05546 499 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 ACPPP15309 386 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 CD97P48960 835 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 MLLT10P55197 1068 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 SOX8P57073 446 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 EEF1A2Q05639 463 aaKnown RBP23.37■■□□□ 1.33
UPF3A-209ENST00000492270 Q0VFX4 171 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 IGFBP7Q16270 282 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 ATG9BQ674R7 924 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 RBMXL3Q8N7X1 1067 aaKnown RBP23.37■■□□□ 1.33
UPF3A-209ENST00000492270 TRIM44Q96DX7 344 aaPredicted RBP23.37■■□□□ 1.33
UPF3A-209ENST00000492270 FAM129AQ9BZQ8 928 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 ANKHQ9HCJ1 492 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 WWOXQ9NZC7 414 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 LUZP4Q9P127 313 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 NAALAD2Q9Y3Q0 740 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 NBASA2RRP1 2371 aa23.37■■□□□ 1.33
UPF3A-209ENST00000492270 HMX2A2RU54 273 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 DPM1O60762 260 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 BMP10O95393 424 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 B3GALT4O96024 378 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 HEXBP07686 556 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 KCNC1P48547 511 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 IRF9Q00978 393 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 UAP1Q16222 522 aaPredicted RBP23.36■■□□□ 1.33
UPF3A-209ENST00000492270 KIAA1191Q96A73 305 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 FMO2Q99518 471 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 AIF1LQ9BQI0 150 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 ACSS3Q9H6R3 686 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 ALG9Q9H6U8 611 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 ZBTB20Q9HC78 741 aaPredicted RBP23.36■■□□□ 1.33
UPF3A-209ENST00000492270 ZNF160Q9HCG1 818 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 ZFP69BQ9UJL9 534 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 MKL2Q9ULH7 1088 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 RNF112Q9ULX5 631 aa23.36■■□□□ 1.33
UPF3A-209ENST00000492270 CPAMD8Q8IZJ3 1885 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 KLHL18O94889 574 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 ACSL3O95573 720 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 COX6A1P12074 109 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 TFEBP19484 476 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 PHBP35232 272 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 XCR1P46094 333 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 HSPA7P48741 367 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 CDC16Q13042 620 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 RBBP5Q15291 538 aaKnown RBP23.35■■□□□ 1.33
UPF3A-209ENST00000492270 GLE1Q53GS7 698 aaKnown RBP23.35■■□□□ 1.33
UPF3A-209ENST00000492270 MROH9Q5TGP6 573 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 RELL1Q8IUW5 271 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 TBC1D19Q8N5T2 526 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 AMER2Q8N7J2 671 aa23.35■■□□□ 1.33
UPF3A-209ENST00000492270 OR51Q1Q8NH59 317 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms