RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 TRIM44Q96DX7 344 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-214ENST00000490398 THAP11Q96EK4 314 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 SARGQ9BW04 601 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 AICDAQ9GZX7 198 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 ALG9Q9H6U8 611 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 ZBTB20Q9HC78 741 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-214ENST00000490398 NXT1Q9UKK6 140 aaKnown RBP17.19■□□□□ 0.34
COL9A3-214ENST00000490398 DYRK1BQ9Y463 629 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 TRBC2A0A5B9 178 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 ZNF860A6NHJ4 632 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 C4orf51C9J302 202 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 TXNDC9O14530 226 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 HSPA7P48741 367 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 RRADP55042 308 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 ATP6V0D1P61421 351 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 OCA2Q04671 838 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 TLE1Q04724 770 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 KLRB1Q12918 225 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 NAB1Q13506 487 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 UAP1Q16222 522 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-214ENST00000490398 RBBP7Q16576 425 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 GLE1Q53GS7 698 aaKnown RBP17.18■□□□□ 0.34
COL9A3-214ENST00000490398 FAAH2Q6GMR7 532 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 RAPH1Q70E73 1250 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 ISCA2Q86U28 154 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 CENPLQ8N0S6 344 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-214ENST00000490398 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 KCTD4Q8WVF5 259 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 KIAA1191Q96A73 305 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 NXNL1Q96CM4 212 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 FER1L6-AS2Q96M78 137 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 IP6K3Q96PC2 410 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 FMO2Q99518 471 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 ACSS3Q9H6R3 686 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 ZNF552Q9H707 407 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-214ENST00000490398 PELI2Q9HAT8 420 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 HCN3Q9P1Z3 774 aa17.18■□□□□ 0.34
COL9A3-214ENST00000490398 MTRF1LQ9UGC7 380 aaKnown RBP17.18■□□□□ 0.34
COL9A3-214ENST00000490398 IDSB3KWA1 339 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 NDUFS4O43181 175 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 RDH16O75452 317 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 UBR5O95071 2799 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-214ENST00000490398 NSA2O95478 260 aaKnown RBP17.17■□□□□ 0.34
COL9A3-214ENST00000490398 SERPIND1P05546 499 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 TFEBP19484 476 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 GRK3P35626 688 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 CASRP41180 1078 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 AVPR1BP47901 424 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 CD97P48960 835 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 HNMTP50135 292 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 HYAL2Q12891 473 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 ILF2Q12905 390 aaKnown RBP17.17■□□□□ 0.34
COL9A3-214ENST00000490398 NDUFA9Q16795 377 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 ATG9BQ674R7 924 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 SLCO4C1Q6ZQN7 724 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 PARP9Q8IXQ6 854 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 TEX19Q8NA77 164 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 OR5T3Q8NGG3 340 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 CYTH2Q99418 400 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 MFRPQ9BY79 579 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 FUT8Q9BYC5 575 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 TGIF2Q9GZN2 237 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 KLHL31Q9H511 634 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 SEMA3GQ9NS98 782 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 GPR83Q9NYM4 423 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 LUZP4Q9P127 313 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 NFU1Q9UMS0 254 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 NAALAD2Q9Y3Q0 740 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 MAP4K5Q9Y4K4 846 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 KCNE2Q9Y6J6 123 aa17.17■□□□□ 0.34
COL9A3-214ENST00000490398 H0YIG0 161 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 BMP10O95393 424 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 C2P06681 752 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 EPORP19235 508 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 CRABP2P29373 138 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 GGT5P36269 586 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 HNF4AP41235 474 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 EMP2P54851 167 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 MLLT10P55197 1068 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 OLR1P78380 273 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 EEF1A2Q05639 463 aaKnown RBP17.16■□□□□ 0.34
COL9A3-214ENST00000490398 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
COL9A3-214ENST00000490398 IGFBP7Q16270 282 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 ADNP2Q6IQ32 1131 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 AFAP1L2Q8N4X5 818 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 RBMXL3Q8N7X1 1067 aaKnown RBP17.16■□□□□ 0.34
COL9A3-214ENST00000490398 CEP112Q8N8E3 955 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 CLEC1AQ8NC01 280 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 NT5CQ8TCD5 201 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 ATOH8Q96SQ7 321 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 SMAD5Q99717 465 aaKnown RBP17.16■□□□□ 0.34
COL9A3-214ENST00000490398 RBCK1Q9BYM8 510 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 MKKSQ9NPJ1 570 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-214ENST00000490398 ATP13A2Q9NQ11 1180 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 SNX15Q9NRS6 342 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 WWOXQ9NZC7 414 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 CD274Q9NZQ7 290 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 ZFP69BQ9UJL9 534 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 ANAPC2Q9UJX6 822 aa17.16■□□□□ 0.34
COL9A3-214ENST00000490398 PTBP2Q9UKA9 531 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms