RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PWP1Q13610 501 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 SMU1Q2TAY7 513 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ADPRMQ3LIE5 342 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 VN1R4Q7Z5H5 301 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 PIGWQ7Z7B1 504 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 DNAJC22Q8N4W6 341 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 NT5CQ8TCD5 201 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 CREB3L4Q8TEY5 395 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 C10orf82Q8WW14 230 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 COL26A1Q96A83 441 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 TM4SF19Q96DZ7 209 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 CCT8L2Q96SF2 557 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 MS4A8Q9BY19 250 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ACPTQ9BZG2 426 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 KCNK13Q9HB14 408 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 PDE7BQ9NP56 450 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 FARSBQ9NSD9 589 aaKnown RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ATXN7L1Q9ULK2 861 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 MAGEB17A8MXT2 336 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 LSM1O15116 133 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CASC3O15234 703 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 RGS14O43566 566 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 LCMT2O60294 686 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SRPX2O60687 465 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 TBX6O95947 436 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SERPINA6P08185 405 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SLC35G6P0C7Q6 338 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 PCNAP12004 261 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CUL3Q13618 768 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 RBBP5Q15291 538 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 TRIP6Q15654 476 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 MANEAQ5SRI9 462 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CDCP2Q5VXM1 449 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 FAM219BQ5XKK7 198 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 ADNP2Q6IQ32 1131 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 OGFOD2Q6N063 350 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 FBXO42Q6P3S6 717 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 RBM44Q6ZP01 1051 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 ASPGQ86U10 573 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 PLD3Q8IV08 490 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 DDIASQ8IXT1 998 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 ZNF655Q8N720 491 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 RFWD2Q8NHY2 731 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CCT6BQ92526 530 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CCDC74BQ96LY2 380 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 MTERF1Q99551 399 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SERPINI1Q99574 410 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 CCDC28BQ9BUN5 200 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SLC6A16Q9GZN6 736 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SYNPO2LQ9H987 977 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 FAM60AQ9NP50 221 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 NMRK1Q9NWW6 199 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.37
TRAIP-210ENST00000489948 PTGDR2Q9Y5Y4 395 aa12.77□□□□□ -0.37
TRAIP-210ENST00000489948 TMX2-CTNND1H3BSU7 103 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TXNDC9O14530 226 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 SLC30A4O14863 429 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 ZSCAN9O15535 394 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 NDUFS4O43181 175 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TSFMP43897 325 aaKnown RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 IDH3AP50213 366 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 RPS13P62277 151 aaKnown RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 IRX1P78414 480 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 INSM1Q01101 510 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 RGS1Q08116 209 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 CYP4F3Q08477 520 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 IMPG1Q17R60 797 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 SLC9B1Q4ZJI4 515 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TMTC4Q5T4D3 741 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 CYB5D1Q6P9G0 228 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 Q6ZSR9 355 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 ACAD11Q709F0 780 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 LARP4Q71RC2 724 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 CAMKVQ8NCB2 501 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 OR2T11Q8NH01 316 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 RERGQ96A58 199 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 C11orf24Q96F05 449 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 FCRL1Q96LA6 429 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 PPP3R2Q96LZ3 170 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 C3orf30Q96M34 536 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 HBEGFQ99075 208 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TMEM120AQ9BXJ8 343 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 FAM107BQ9H098 131 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 KLHL25Q9H0H3 589 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TCF7L2Q9NQB0 619 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 SIRT5Q9NXA8 310 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 SIDT1Q9NXL6 827 aaKnown RBP12.76□□□□□ -0.37
TRAIP-210ENST00000489948 ASIC5Q9NY37 505 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 VPS29Q9UBQ0 182 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms