RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HGFP14210 728 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF37AP17032 561 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 HK1P19367 917 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 C4BPBP20851 252 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 AZGP1P25311 298 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PTBP1P26599 531 aaKnown RBP eCLIP4.61□□□□□ -1.674e-9■□□□□ 10.7
SNRNP40-206ENST00000489853 C21orf33P30042 268 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ADRA1BP35368 520 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 AVPR1AP37288 418 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS19P39019 145 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GSTM5P46439 218 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CAPZA2P47755 286 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ZFP36L2P47974 494 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 DAPP51397 102 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ATP12AP54707 1039 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ABATP80404 500 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 POU4F1Q01851 419 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SP2Q02086 613 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PUDPQ08623 228 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ABRQ12979 859 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 MXD4Q14582 209 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SMAD1Q15797 465 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ETFDHQ16134 617 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 NKG7Q16617 165 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 KYAT1Q16773 422 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PYDC2Q56P42 97 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 TECRLQ5HYJ1 363 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PDSS1Q5T2R2 415 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM102AQ5T9C2 384 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 HES5Q5TA89 166 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 KIAA1614Q5VZ46 1190 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ARHGAP17Q68EM7 881 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CLEC6AQ6EIG7 209 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 RGS7BPQ6MZT1 257 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC27A4Q6P1M0 643 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SCYL2Q6P3W7 929 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM107Q6UX40 140 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 HSDL2Q6YN16 418 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 KRT74Q7RTS7 529 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GALNT5Q7Z7M9 940 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 STX12Q86Y82 276 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CLEC10AQ8IUN9 316 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SIAH1Q8IUQ4 282 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PSTKQ8IV42 348 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CEP97Q8IW35 865 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CAMKK1Q8N5S9 505 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ATG16L2Q8NAA4 619 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 C19orf18Q8NEA5 215 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 AGBL3Q8NEM8 1001 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 NLGN2Q8NFZ4 835 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 OR8J3Q8NGG0 315 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 OR52K1Q8NGK4 314 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 C9orf43Q8TAL5 461 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FBXO30Q8TB52 745 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GANCQ8TET4 914 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GGHQ92820 318 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 DNASE1L2Q92874 299 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FUBP1Q96AE4 644 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CREB3L1Q96BA8 519 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ITCHQ96J02 903 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 EXOC2Q96KP1 924 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SENP8Q96LD8 212 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CCDC17Q96LX7 622 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF583Q96ND8 569 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 VAT1Q99536 393 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GAL3ST1Q99999 423 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 RTP3Q9BQQ7 232 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 RHNO1Q9BSD3 238 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ASPNQ9BXN1 380 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR63Q9BZJ6 419 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CD244Q9BZW8 370 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 MCOLN1Q9GZU1 580 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 MED28Q9H204 178 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GAREM1Q9H706 876 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 CARS2Q9HA77 564 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GALNT9Q9HCQ5 603 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ABCC13Q9NSE7 274 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM86C1Q9NVL1 165 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 GPATCH2LQ9NWQ4 482 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PPP1R14DQ9NXH3 145 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ZIM2Q9NZV7 527 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 KCMF1Q9P0J7 381 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 NYAP2Q9P242 653 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SPASTQ9UBP0 616 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 TJP2Q9UDY2 1190 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 EPHA6Q9UF33 1036 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 STUB1Q9UNE7 303 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 PLCL2Q9UPR0 1127 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 JAG2Q9Y219 1238 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 DERAQ9Y315 318 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 DNAJC15Q9Y5T4 150 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 LTBP3Q9NS15 1303 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 DOT1LQ8TEK3 1739 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 COL1A2P08123 1366 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SIPA1L1O43166 1804 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM95CA0A1B0GW59 222 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM82A0PJX8 343 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PIPSLA2A3N6 862 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 NEMP2A6NFY4 417 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PPP6CO00743 305 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms