RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 NCF1P14598 390 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 CXCR2P25025 360 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 GRK3P35626 688 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 GLRBP48167 497 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 CCR8P51685 355 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 PLTPP55058 493 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 TSNQ15631 228 aaKnown RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 MINDY4Q4G0A6 757 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NDUFAF7Q7L592 441 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 THOC6Q86W42 341 aaKnown RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 SIRT6Q8N6T7 355 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 MFSD9Q8NBP5 474 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 GALNT11Q8NCW6 608 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 OR5T3Q8NGG3 340 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 TM4SF19Q96DZ7 209 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 PDLIM5Q96HC4 596 aaKnown RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 EGFL8Q99944 293 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 MCMBPQ9BTE3 642 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 VN1R1Q9GZP7 353 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 GPAMQ9HCL2 828 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 PTGFRNQ9P2B2 879 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NTNG1Q9Y2I2 539 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NAALAD2Q9Y3Q0 740 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 UTP20O75691 2785 aaKnown RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 IGHV1-45A0A0A0MS14 117 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 TCRBV9S1A1TA0A576 114 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 ESYT3A0FGR9 886 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CLEC18AA5D8T8 446 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 DNAJB6O75190 326 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CDC123O75794 336 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 FAM155BO75949 473 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 NSA2O95478 260 aaKnown RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 F10P00742 488 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 PRR35P0CG20 571 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 XCR1P46094 333 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 GPX6P59796 221 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 OLR1P78380 273 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 ESPL1Q14674 2120 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 PCOLCEQ15113 449 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 NR6A1Q15406 480 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 FBXO48Q5FWF7 155 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 LRRK2Q5S007 2527 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CLEC18BQ6UXF7 455 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 FRA10AC1Q70Z53 315 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CNTRLQ7Z7A1 2325 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 RP1L1Q8IWN7 2480 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 KBTBD2Q8IY47 623 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 IQCKQ8N0W5 287 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 FAM26EQ8N5C1 309 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CLEC18CQ8NCF0 446 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CATSPER1Q8NEC5 780 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 ABHD11Q8NFV4 315 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 OR51Q1Q8NH59 317 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 FBXO25Q8TCJ0 367 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 BRIX1Q8TDN6 353 aaKnown RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 SLC5A11Q8WWX8 675 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 ATL1Q8WXF7 558 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 TM9SF4Q92544 642 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 THAP11Q96EK4 314 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 VPS50Q96JG6 964 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 WDR77Q9BQA1 342 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 TGIF2Q9GZN2 237 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 ANKHQ9HCJ1 492 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 CTNNAL1Q9UBT7 734 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 NOVA2Q9UNW9 492 aaKnown RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 SLC22A14Q9Y267 594 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 UTP11Q9Y3A2 253 aaKnown RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 DYRK1BQ9Y463 629 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 PCDHGA10Q9Y5H3 936 aa13.26□□□□□ -0.29
VTI1A-206ENST00000489142 USP9XQ93008 2570 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-206ENST00000489142 TRBC2A0A5B9 178 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 H0YIG0 161 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 NDC80O14777 642 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 KLHL41O60662 606 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 SEC24DO94855 1032 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 UQCRHP07919 91 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 SLC35G6P0C7Q6 338 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 C8orf89P0DMQ9 161 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 ITGAMP11215 1152 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 VARSP26640 1264 aaKnown RBP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 HNF4AP41235 474 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 GDF5P43026 501 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 SLC12A2P55011 1212 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 CSHL1Q14406 222 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 USP10Q14694 798 aaKnown RBP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 EFTUD2Q15029 972 aaKnown RBP eCLIP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 B3GNTL1Q67FW5 361 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 ZDHHC24Q6UX98 284 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 Q6ZS92 163 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 C3orf62Q6ZUJ4 267 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 OR4K1Q8NGD4 311 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 DNAJB14Q8TBM8 379 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms