RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SPATA4Q8NEY3 305 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 OR51Q1Q8NH59 317 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 DNAJB14Q8TBM8 379 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 SLC13A3Q8WWT9 602 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 ERP44Q9BS26 406 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 RHOJQ9H4E5 214 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 ANKHQ9HCJ1 492 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 WHRNQ9P202 907 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 NTNG1Q9Y2I2 539 aa11.88□□□□□ -0.51
SRRM1-216ENST00000489130 COPG1Q9Y678 874 aaKnown RBP11.88□□□□□ -0.51
SRRM1-216ENST00000489130 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 TRBC2A0A5B9 178 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 BLACEA4D250 179 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 SGK494L7N484 410 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 NDUFS4O43181 175 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 SEMA7AO75326 666 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 JRKO75564 520 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 AGFG2O95081 481 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 GP1BBP13224 206 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 SAT1P21673 171 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 XCR1P46094 333 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 TAS2R39P59534 338 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
SRRM1-216ENST00000489130 CDKL1Q00532 357 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 ILF2Q12905 390 aaKnown RBP11.87□□□□□ -0.51
SRRM1-216ENST00000489130 PWP1Q13610 501 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 ZNF460Q14592 562 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 NR6A1Q15406 480 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 EIF2S3LQ2VIR3 472 aaKnown RBP11.87□□□□□ -0.51
SRRM1-216ENST00000489130 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 AFAP1L2Q8N4X5 818 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 NKAPQ8N5F7 415 aaKnown RBP11.87□□□□□ -0.51
SRRM1-216ENST00000489130 ZCCHC10Q8TBK6 192 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 BRIX1Q8TDN6 353 aaKnown RBP11.87□□□□□ -0.51
SRRM1-216ENST00000489130 SLC5A11Q8WWX8 675 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 NEIL2Q969S2 332 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 VPS39Q96JC1 886 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 CNDP1Q96KN2 507 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 IMMP1LQ96LU5 166 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 POPDC3Q9HBV1 291 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 SMYD2Q9NRG4 433 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 HCN3Q9P1Z3 774 aa11.87□□□□□ -0.51
SRRM1-216ENST00000489130 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-216ENST00000489130 NPEPPSL1A6NEC2 478 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CDC7O00311 574 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 EIF3HO15372 352 aaKnown RBP eCLIP11.86□□□□□ -0.51
SRRM1-216ENST00000489130 RAD51CO43502 376 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 OR1F1O43749 312 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 RDH16O75452 317 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 WISP3O95389 354 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CELA2AP08217 269 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 ICAM2P13598 275 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 SCTRP47872 440 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 HNMTP50135 292 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 AP2B1P63010 937 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 MEF2AQ02078 507 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CALCOCO2Q13137 446 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CSHL1Q14406 222 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 HERC3Q15034 1050 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 MINDY4Q4G0A6 757 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CATSPEREQ5SY80 951 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 MAATS1Q7Z4T9 603 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 ADAMTSL2Q86TH1 951 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CEP97Q8IW35 865 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 TBC1D19Q8N5T2 526 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 ZNF740Q8NDX6 193 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 NT5CQ8TCD5 201 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 SSC4DQ8WTU2 575 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 PYROXD1Q8WU10 500 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 ANKRD49Q8WVL7 239 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 METTL21AQ8WXB1 218 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 MOCOSQ96EN8 888 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 CYTH2Q99418 400 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 DPH5Q9H2P9 285 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 SPNS1Q9H2V7 528 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 AGPAT4Q9NRZ5 378 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 PTGFRNQ9P2B2 879 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-216ENST00000489130 NAALAD2Q9Y3Q0 740 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 OARD1Q9Y530 152 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 DOCK10Q96BY6 2186 aa11.86□□□□□ -0.51
SRRM1-216ENST00000489130 DYTNA2CJ06 578 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 ANKUB1A6NFN9 424 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 PIAS1O75925 651 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 ITGAMP11215 1152 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 IL10P22301 178 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 SSTR1P30872 391 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 AHRP35869 848 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 AGTR2P50052 363 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 ARG2P78540 354 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 REEP5Q00765 189 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 RGS1Q08116 209 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 CDC16Q13042 620 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 TSNQ15631 228 aaKnown RBP11.85□□□□□ -0.51
SRRM1-216ENST00000489130 MFSD4BQ5TF39 518 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 PLAG1Q6DJT9 500 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms