RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CAMKVQ8NCB2 501 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 NT5CQ8TCD5 201 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 C17orf62Q9BQA9 187 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 ACTL8Q9H568 366 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 MKS1Q9NXB0 559 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 CPSF2Q9P2I0 782 aaKnown RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 OPTCQ9UBM4 332 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 MRPS2Q9Y399 296 aaKnown RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 COL6A6A6NMZ7 2263 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 PIEZO2Q9H5I5 2752 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 TNRC6AQ8NDV7 1962 aaKnown RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 IGLV3-12A0A075B6K2 115 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SMIM23A6NLE4 172 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 A8MT66 165 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 OR1F1O43749 312 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SIX3O95343 332 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 TBX6O95947 436 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 GSTM2P28161 218 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 PWP1Q13610 501 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 COL9A2Q14055 689 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SLBPQ14493 270 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 VN1R5Q7Z5H4 357 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 TRABD2AQ86V40 505 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 AFAP1L2Q8N4X5 818 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 PTGR2Q8N8N7 351 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SNX31Q8N9S9 440 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 ADAMTS17Q8TE56 1095 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 CREB3L4Q8TEY5 395 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 MOCOSQ96EN8 888 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 PTCD3Q96EY7 689 aaKnown RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SEC16BQ96JE7 1060 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 EFCAB11Q9BUY7 163 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 SLC6A16Q9GZN6 736 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 AICDAQ9GZX7 198 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 TCFL5Q9UL49 500 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 PLAAQ9Y263 795 aa17.74■□□□□ 0.43
PTCD3-217ENST00000488801 FARSAQ9Y285 508 aaKnown RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 TNPO3Q9Y5L0 923 aaKnown RBP17.74■□□□□ 0.43
PTCD3-217ENST00000488801 CPAMD8Q8IZJ3 1885 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 CCDC151A5D8V7 595 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 C9J4A7 227 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 CLGNO14967 610 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 GLRA3O75311 464 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 CREG1O75629 220 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 ALBP02768 609 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 STATHP02808 62 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 SLC35G6P0C7Q6 338 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 KRT15P19012 456 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 CXCR2P25025 360 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 RPS18P62269 152 aaKnown RBP17.73■□□□□ 0.43
PTCD3-217ENST00000488801 CDC20Q12834 499 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 IL10RAQ13651 578 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 DOC2AQ14183 400 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 ARHGAP40Q5TG30 622 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 GPR155Q7Z3F1 870 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 SYVN1Q86TM6 617 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 IQCKQ8N0W5 287 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 TBC1D19Q8N5T2 526 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 AMER3Q8N944 861 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 KCT2Q8NC54 265 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 SLC13A3Q8WWT9 602 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 SCYL1Q96KG9 808 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 DRC3Q9H069 523 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 WDR54Q9H977 334 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 DCDC2Q9UHG0 476 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 PCTPQ9UKL6 214 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 SLC22A7Q9Y694 548 aa17.73■□□□□ 0.43
PTCD3-217ENST00000488801 BSNQ9UPA5 3926 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 VSTM2BA6NLU5 285 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 NDUFS4O43181 175 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 UGDHO60701 494 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 NSA2O95478 260 aaKnown RBP17.72■□□□□ 0.43
PTCD3-217ENST00000488801 EPB42P16452 691 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 ALAS2P22557 587 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 CRHR1P34998 444 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 PIK3CGP48736 1102 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 MC1RQ01726 317 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 ZNF844Q08AG5 666 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 CHIT1Q13231 466 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 GTF2H2Q13888 395 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 DSG2Q14126 1118 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 GTF2H2CQ6P1K8 395 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 TMIGD1Q6UXZ0 262 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 OVCH1Q7RTY7 1134 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 GOLGA7Q7Z5G4 137 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 TMEM151BQ8IW70 566 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 TRPV3Q8NET8 790 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 TTLQ8NG68 377 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 SPSB2Q99619 263 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 MACROD1Q9BQ69 325 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 RHBGQ9H310 441 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 ZBTB26Q9HCK0 441 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 ZNF490Q9ULM2 529 aaPredicted RBP17.72■□□□□ 0.43
PTCD3-217ENST00000488801 TSC22D4Q9Y3Q8 395 aa17.72■□□□□ 0.43
PTCD3-217ENST00000488801 C4orf51C9J302 202 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 NKX2-8O15522 239 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 SMIM24O75264 130 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms